RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TAF10Q12962 218 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ITGA9Q13797 1035 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 POU6F1Q14863 301 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C10orf120Q5SQS8 335 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TMCO4Q5TGY1 634 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SNX30Q5VWJ9 437 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 LIPMQ5VYY2 423 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 KLHDC10Q6PID8 442 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ALYREFQ86V81 257 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DBF4BQ8NFT6 615 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 AZIN2Q96A70 460 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TSPAN17Q96FV3 270 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MIPEPQ99797 713 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C1QTNF1Q9BXJ1 281 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GPR62Q9BZJ7 368 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 IL1RAPL1Q9NZN1 696 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 VTI1BQ9UEU0 232 aa17.93■□□□□ 0.46
HLA-DQB1-204ENST00000399084 F8W8V4 182 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ANP32DO95626 131 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 KITP10721 976 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 POLD3Q15054 466 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NEPROQ6NW34 567 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FBXL22Q6P050 247 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CRIPAKQ8N1N5 446 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PLD6Q8N2A8 252 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 BBS5Q8N3I7 341 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 STYXQ8WUJ0 223 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SCG3Q8WXD2 468 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CCDC126Q96EE4 140 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TTPALQ9BTX7 342 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ACE2Q9BYF1 805 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DRC3Q9H069 523 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NUDT5Q9UKK9 219 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DOCK4Q8N1I0 1966 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 B2RBV5 119 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC22A2O15244 555 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NBNO60934 754 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HSPA4LO95757 839 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ADSLP30566 484 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GCKP35557 465 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC11A1P49279 550 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 IDH3AP50213 366 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CLCN5P51795 746 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC12A2P55011 1212 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TUBB3Q13509 450 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SERINC3Q13530 473 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MGAT5BQ3V5L5 792 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TSTD2Q5T7W7 516 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C6orf163Q5TEZ5 329 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ESRP1Q6NXG1 681 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CMTM5Q96DZ9 223 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HMCESQ96FZ2 354 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF778Q96MU6 729 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NUDCD1Q96RS6 583 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CDH19Q9H159 772 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TASP1Q9H6P5 420 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF395Q9H8N7 513 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TRPC7Q9HCX4 862 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MARCH5Q9NX47 278 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF212Q9UDV6 495 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MARCOQ9UEW3 520 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FBXO5Q9UKT4 447 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CORO1CQ9ULV4 474 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RAP2CQ9Y3L5 183 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 BACE2Q9Y5Z0 518 aa17.92■□□□□ 0.46
HLA-DQB1-204ENST00000399084 LOC285095A0A1B0GVY8 99 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC12A8A0AV02 714 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF195O14628 629 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 AOC2O75106 756 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GALTP07902 379 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC35E2BP0CK96 405 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CES1P23141 567 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ARNTP27540 789 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 LEPRP48357 1165 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GPR15P49685 360 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PRKAA1Q13131 559 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CNGA3Q16281 694 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PSMD5Q16401 504 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CFAP157Q5JU67 520 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RABGAP1LQ5R372 815 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TTC7BQ86TV6 843 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF419Q96HQ0 510 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PGLYRP2Q96PD5 576 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MRPL57Q9BQC6 102 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MAGEH1Q9H213 219 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DENND2DQ9H6A0 471 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 C15orf41Q9Y2V0 281 aa17.91■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FAM95CA0A1B0GW59 222 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CARNS1A5YM72 827 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MROH6A6NGR9 719 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 A8MUI8 341 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TARM1B6A8C7 271 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PEX11AO75192 247 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 HLA-DPA1P20036 260 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 GABRB3P28472 473 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MAP2K2P36507 400 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PGM1P36871 562 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DNAJB13P59910 316 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SDHAF4Q5VUM1 108 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms