RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 IGLV3-25P01717 112 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 CD97P48960 835 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 MAPK10P53779 464 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 ZFP36L1Q07352 338 aaKnown RBP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SGCGQ13326 291 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 FBXL22Q6P050 247 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 ATP11CQ8NB49 1132 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 C9orf43Q8TAL5 461 aaPredicted RBP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SCG3Q8WXD2 468 aaKnown RBP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 RPRD1AQ96P16 312 aaPredicted RBP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SIRPGQ9P1W8 387 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 SLC12A6Q9UHW9 1150 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 DOLKQ9UPQ8 538 aa14.05□□□□□ -0.16
FAM3B-204ENST00000398652 STMND1H3BQB6 276 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 K7ERQ8 282 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 M0QYT0 321 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 AGRPO00253 132 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 AP1G1O43747 822 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 STX10O60499 249 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 LEFTY1O75610 366 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 TRUB2O95900 331 aaKnown RBP14.04□□□□□ -0.16
FAM3B-204ENST00000398652 PAEPP09466 180 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 ITGB7P26010 798 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 RPL13P26373 211 aaKnown RBP14.04□□□□□ -0.16
FAM3B-204ENST00000398652 ATP1A2P50993 1020 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 KRT83P78385 493 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 FAXCQ5TGI0 409 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 TMEM164Q5U3C3 297 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 LVRNQ6Q4G3 990 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 CCNJLQ8IV13 435 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 FSTL5Q8N475 847 aaPredicted RBP14.04□□□□□ -0.16
FAM3B-204ENST00000398652 UBR7Q8N806 425 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 OR6C4Q8NGE1 309 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 PCDH19Q8TAB3 1148 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 ASB12Q8WXK4 309 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 C2orf49Q9BVC5 232 aaPredicted RBP14.04□□□□□ -0.16
FAM3B-204ENST00000398652 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 ZNF71Q9NQZ8 489 aaPredicted RBP14.04□□□□□ -0.16
FAM3B-204ENST00000398652 TMPRSS4Q9NRS4 437 aa14.04□□□□□ -0.16
FAM3B-204ENST00000398652 DOCK4Q8N1I0 1966 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 RRM1P23921 792 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 RECQLP46063 649 aaPredicted RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 IRAK1P51617 712 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 PPARDQ03181 441 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 EIF4EBP2Q13542 120 aaPredicted RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 ELOCQ15369 112 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 STILQ15468 1287 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 CNGA2Q16280 664 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 C22orf39Q6P5X5 142 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 DPY19L3Q6ZPD9 716 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 JPH3Q8WXH2 748 aaPredicted RBP14.03□□□□□ -0.16
FAM3B-204ENST00000398652 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 PSMB7Q99436 277 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 ZSWIM1Q9BR11 485 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 WASF2Q9Y6W5 498 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 MED13Q9UHV7 2174 aa14.03□□□□□ -0.16
FAM3B-204ENST00000398652 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.16
FAM3B-204ENST00000398652 TSPAN6O43657 245 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 SNAP91O60641 907 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 CLDN11O75508 207 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 AGFG2O95081 481 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 YEATS4O95619 227 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 ALPIP09923 528 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 SLC2A3P11169 496 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
FAM3B-204ENST00000398652 L1CAMP32004 1257 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 RPL34P49207 117 aaKnown RBP14.02□□□□□ -0.17
FAM3B-204ENST00000398652 BLKP51451 505 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 YPEL5P62699 121 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 ADAM9Q13443 819 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 CUL4AQ13619 759 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.17
FAM3B-204ENST00000398652 TMEM270Q6UE05 265 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 PARS2Q7L3T8 475 aaKnown RBP14.02□□□□□ -0.17
FAM3B-204ENST00000398652 GPBAR1Q8TDU6 330 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 NKD1Q969G9 470 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 CENPTQ96BT3 561 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 TNKS2Q9H2K2 1166 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 VANGL2Q9ULK5 521 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 COQ4Q9Y3A0 265 aa14.02□□□□□ -0.17
FAM3B-204ENST00000398652 MTSS1O43312 755 aa14.01□□□□□ -0.17
FAM3B-204ENST00000398652 LIFP15018 202 aa14.01□□□□□ -0.17
FAM3B-204ENST00000398652 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
FAM3B-204ENST00000398652 CCR1P32246 355 aa14.01□□□□□ -0.17
FAM3B-204ENST00000398652 IGFALSP35858 605 aa14.01□□□□□ -0.17
FAM3B-204ENST00000398652 PITX1P78337 314 aaPredicted RBP14.01□□□□□ -0.17
FAM3B-204ENST00000398652 CBWD6Q4V339 395 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms