RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TSGA13Q96PP4 275 aa16■□□□□ 0.15
MBD1-207ENST00000398488 C6orf106Q9H6K1 298 aaPredicted RBP16■□□□□ 0.15
MBD1-207ENST00000398488 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16■□□□□ 0.15
MBD1-207ENST00000398488 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
MBD1-207ENST00000398488 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
MBD1-207ENST00000398488 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 KPNA3O00505 521 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 MAP3K13O43283 966 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PIGNO95427 931 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 RECQLP46063 649 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 MAXP61244 160 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 CCDC6Q16204 474 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PPP2R5EQ16537 467 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PIP5KL1Q5T9C9 394 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 MEI1Q5TIA1 1274 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 AGBL4Q5VU57 503 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 USP30Q70CQ3 517 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 TEX26Q8N6G2 289 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 GDAP1L1Q96MZ0 367 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 ZNF599Q96NL3 588 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 OSBPL8Q9BZF1 889 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 C10orf88Q9H8K7 445 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 TRMT1Q9NXH9 659 aaKnown RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 OTOGLQ3ZCN5 2332 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 CEP192Q8TEP8 1941 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 TCRBV7S2A1N4TA0A589 114 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 MATN3O15232 486 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 NRDCO43847 1150 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 POP4O95707 220 aaKnown RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 IGSF6O95976 241 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PRNPP04156 253 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 UGT2B4P06133 528 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 ITIH2P19823 946 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 CR2P20023 1033 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 CCNCP24863 283 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PPIDQ08752 370 aaKnown RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 ZBTB17Q13105 803 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 RFTN1Q14699 578 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 TTC31Q49AM3 519 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 BBS12Q6ZW61 710 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PARS2Q7L3T8 475 aaKnown RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 DSG4Q86SJ6 1040 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 SRLQ86TD4 932 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 ZSWIM9Q86XI8 627 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 HDAC11Q96DB2 347 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 CCDC114Q96M63 670 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 KLHL32Q96NJ5 620 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 PSKH2Q96QS6 385 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 OMDQ99983 421 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 FAM118BQ9BPY3 351 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 CINPQ9BW66 212 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 SEMA4AQ9H3S1 761 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 SMOC1Q9H4F8 434 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 TMEM74BQ9NUR3 256 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
MBD1-207ENST00000398488 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
MBD1-207ENST00000398488 TNRC6BQ9UPQ9 1833 aaKnown RBP15.98■□□□□ 0.15
MBD1-207ENST00000398488 GON4LQ3T8J9 2241 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 MIF4GDA9UHW6 222 aaKnown RBP15.98■□□□□ 0.15
MBD1-207ENST00000398488 C1QTNF3-AMACRE9PGA6 284 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 KCNK1O00180 336 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 SPINT1O43278 529 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 MAOBP27338 520 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 OXTRP30559 389 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 PTPN7P35236 360 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 PLA2G5P39877 138 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 DHPSP49366 369 aaPredicted RBP15.98■□□□□ 0.15
MBD1-207ENST00000398488 ADPRHP54922 357 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CCDC173Q0VFZ6 552 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 BYSLQ13895 437 aaKnown RBP15.98■□□□□ 0.15
MBD1-207ENST00000398488 TFDP2Q14188 446 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 LRRC73Q5JTD7 316 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 FAM46CQ5VWP2 391 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 SLC36A4Q6YBV0 504 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CAMK1DQ8IU85 385 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CCDC13Q8IYE1 715 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CNTD1Q8N815 330 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CCNYQ8ND76 341 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 CEP41Q9BYV8 373 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 EBF2Q9HAK2 575 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 NT5MQ9NPB1 228 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 SEPT3Q9UH03 358 aa15.98■□□□□ 0.15
MBD1-207ENST00000398488 ATXN2Q99700 1313 aaKnown RBP15.97■□□□□ 0.15
MBD1-207ENST00000398488 FAM47DPA6NHR8 397 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 NDUFS2O75306 463 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 SEMA4FO95754 770 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ZFXP17010 805 aaPredicted RBP15.97■□□□□ 0.15
MBD1-207ENST00000398488 TGM1P22735 817 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ITPKAP23677 461 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ABL2P42684 1182 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 MMP13P45452 471 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 SCNN1BP51168 640 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 COPS2P61201 443 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ZNF33AQ06730 810 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 MARC1Q5VT66 337 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 LAIR1Q6GTX8 287 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 NCEH1Q6PIU2 408 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 GDPD4Q6W3E5 623 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms