RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LSM12Q3MHD2 195 aaKnown RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 RHBDF2Q6PJF5 856 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TFAP2DQ7Z6R9 452 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 AMER2Q8N7J2 671 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 OR2T34Q8NGX1 318 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 OR2T3Q8NH03 318 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SLC7A6OSQ96CW6 309 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 C1orf21Q9H246 121 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ELOVL6Q9H5J4 265 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 WRAP73Q9P2S5 460 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 SLC15A5A6NIM6 579 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 GCATO75600 419 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 THP07101 528 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 POU1F1P28069 291 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 DLG1Q12959 904 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SPDYE7PQ495Y7 208 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 NADK2Q4G0N4 442 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 CERCAMQ5T4B2 595 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 ASRGL1Q7L266 308 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TRIM74Q86UV6 250 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TRIM73Q86UV7 250 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 EGFL6Q8IUX8 553 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 ANKRD13AQ8IZ07 590 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 NETO2Q8NC67 525 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 PLEKHA8Q96JA3 519 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TXLNGYQ9BZA5 131 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 SPASTQ9UBP0 616 aa11.17□□□□□ -0.62
HPS4-202ENST00000398145 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
HPS4-202ENST00000398145 KCNU1A8MYU2 1149 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 AOC1P19801 751 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 KRT20P35900 424 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 NNMTP40261 264 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CBX3Q13185 183 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 MGAT5BQ3V5L5 792 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CRY2Q49AN0 593 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 POTEHQ6S545 545 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 GLB1LQ6UWU2 654 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 STRADAQ7RTN6 431 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 SYTL1Q8IYJ3 562 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 NIPA2Q8N8Q9 360 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 UTP15Q8TED0 518 aaKnown RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 FOPNLQ96NB1 174 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 INVSQ9Y283 1065 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 TCRBV7S3A2A0A539 114 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 BBIP1A8MTZ0 92 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 MDM4O15151 490 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CD3EAPO15446 510 aaKnown RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 DLDP09622 509 aaKnown RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 GTF2A2P52657 109 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CDH13P55290 713 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 SLC18A2Q05940 514 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 VEPH1Q14D04 833 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 PKN3Q6P5Z2 889 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 TLDC1Q6P9B6 456 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 ABHD15Q6UXT9 468 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CUZD1Q86UP6 607 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CBR4Q8N4T8 237 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 AADATQ8N5Z0 425 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 PPP1R14BQ96C90 147 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 SEPT5Q99719 369 aaPredicted RBP11.16□□□□□ -0.62
HPS4-202ENST00000398145 B3GNT5Q9BYG0 378 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 ZFYVE28Q9HCC9 887 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 AP3M1Q9Y2T2 418 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 UBR1Q8IWV7 1749 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 AZIN1O14977 448 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 B4GALT5O43286 388 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 RAMP2O60895 175 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 ANXA6P08133 673 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 USP17L7P0C7H9 530 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 NPR3P17342 541 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 PPP3CCP48454 512 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 NUMBP49757 651 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 SPIDRQ14159 915 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 CCDC142Q17RM4 750 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 EGFLAMQ63HQ2 1017 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 MROH8Q9H579 483 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 EURLQ9NYK6 297 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 FAM50BQ9Y247 325 aa11.16□□□□□ -0.62
HPS4-202ENST00000398145 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 SYNDIG1LA6NDD5 238 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 CILPO75339 1184 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 PLCL1Q15111 1095 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 TXNRD3NBQ6F5E7 133 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 LEMD2Q8NC56 503 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 CMASQ8NFW8 434 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 SEPT8Q92599 483 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 SH3KBP1Q96B97 665 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms