RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SIT1Q9Y3P8 196 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.89□□□□□ -1.797e-9■■■□□ 18.2
UBE3A-202ENST00000397954 ST14Q9Y5Y6 855 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CCDC154A6NI56 674 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 WASH4PA8MWX3 477 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SPECC1L-ADORA2AF8WAN1 911 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ZNF561-AS1K7EIQ3 104 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 O00370 1275 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 AREL1O15033 823 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MAGEC1O60732 1142 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CSDE1O75534 798 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MOCS3O95396 460 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 APBB3O95704 486 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 DLATP10515 647 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ACO1P21399 889 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 KRT20P35900 424 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 STAT1P42224 750 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PTPN9P43378 593 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC11A2P49281 568 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NDST1P52848 882 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC5A3P53794 718 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SCAPQ12770 1279 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 DUSP4Q13115 394 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PRKG2Q13237 762 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PNOCQ13519 176 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TCP11X2Q5H9J9 407 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MDH1BQ5I0G3 518 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PITRM1Q5JRX3 1037 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 RABGAP1LQ5R372 815 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 LIN54Q6MZP7 749 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NEK5Q6P3R8 708 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CLEC20AQ6ZU45 233 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 USP30Q70CQ3 517 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 STRADAQ7RTN6 431 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 BNIPLQ7Z465 357 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TMCO2Q7Z6W1 182 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FUKQ8N0W3 1084 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 KCT2Q8NC54 265 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CADM4Q8NFZ8 388 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC35F5Q8WV83 523 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FAM3CQ92520 227 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CYFIP2Q96F07 1278 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CCDC114Q96M63 670 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 HAPLN3Q96S86 360 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MMS19Q96T76 1030 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SEPT5Q99719 369 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MED10Q9BTT4 135 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TMEM120AQ9BXJ8 343 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 BLZF1Q9H2G9 400 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ATXN3LQ9H3M9 355 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NDST4Q9H3R1 872 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 POFUT1Q9H488 388 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TBC1D17Q9HA65 648 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 LRRC4Q9HBW1 653 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CEP350Q5VT06 3117 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC35F4A4IF30 521 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 H3BQ06 376 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 AURKAO14965 403 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 LAMTOR5O43504 91 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 AHCYL1O43865 530 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TMCC2O75069 709 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CNOT4O95628 575 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 COL6A2P12110 1019 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MYF5P13349 255 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ZNF18P17022 549 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HNRNPH3P31942 346 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CA8P35219 290 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HSPA9P38646 679 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MAPKAPK2P49137 400 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HARS2P49590 506 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PPP3CAQ08209 521 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 EIF4EBP2Q13542 120 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PEX6Q13608 980 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TEAD2Q15562 447 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CLPPQ16740 277 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FAM133BQ5BKY9 247 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 LETMD1Q6P1Q0 360 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TRIM65Q6PJ69 517 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SARM1Q6SZW1 724 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 IL27RAQ6UWB1 636 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TMC5Q6UXY8 1006 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 C11orf57Q6ZUT1 292 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SETD3Q86TU7 594 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PALB2Q86YC2 1186 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PHF13Q86YI8 300 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 C1orf210Q8IVY1 113 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SIX6OS1Q8N1H7 587 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 OLIG1Q8TAK6 271 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 WHAMMQ8TF30 809 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 NT5C3BQ969T7 300 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ISG20Q96AZ6 181 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CHAMP1Q96JM3 812 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TMEM209Q96SK2 561 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PLIN2Q99541 437 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PAAF1Q9BRP4 392 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RTKNQ9BST9 563 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 POPDC2Q9HBU9 364 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 DUS2Q9NX74 493 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms