RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TYW5A2RUC4 315 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RGSL1A5PLK6 1076 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TSPAN9O75954 239 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AP2A1O95782 977 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TCF4P15884 667 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 VCLP18206 1134 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ABCE1P61221 599 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MTA1Q13330 715 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PSMA8Q8TAA3 256 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SUN5Q8TC36 379 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 MARK4Q96L34 752 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CYP2S1Q96SQ9 504 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 GPR22Q99680 433 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C12orf65Q9H3J6 166 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RAD21L1Q9H4I0 556 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 WDR37Q9Y2I8 494 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TRIM17Q9Y577 477 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 USP3Q9Y6I4 520 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ANKRD31Q8N7Z5 1873 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PRR5-ARHGAP8B1AHC4 643 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 E5RJQ4 531 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TRIM24O15164 1050 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LZTS3O60299 673 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 STAG3L1P0CL83 205 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PEX2P28328 305 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ADRA1BP35368 520 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LSM3P62310 102 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ARHGAP8P85298 464 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ZBTB6Q15916 424 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 DGKDQ16760 1214 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SLC25A52Q3SY17 297 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C6orf10Q5SRN2 563 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 FNBP1LQ5T0N5 605 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 C6orf52Q5T4I8 152 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SEL1L3Q68CR1 1132 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 LUZP2Q86TE4 346 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 AKAP14Q86UN6 197 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 CNTN4Q8IWV2 1026 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 PCDH20Q8N6Y1 951 aaKnown RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SLC25A23Q9BV35 468 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 GATA5Q9BWX5 397 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-205ENST00000397611 RETREG1Q9H6L5 497 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 ABCB10Q9NRK6 738 aa5.52□□□□□ -1.53
PTPRD-205ENST00000397611 SCN9AQ15858 1988 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 FAM155AB1AL88 458 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 NR5A2O00482 541 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF195O14628 629 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 CFHP08603 1231 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 MRPS5P82675 430 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SNAPC2Q13487 334 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 KRR1Q13601 381 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 ZC3H12BQ5HYM0 836 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PRR23BQ6ZRT6 265 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 NCCRP1Q6ZVX7 275 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 TOP6BLQ8N6T0 577 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 WNT8BQ93098 351 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 ACE2Q9BYF1 805 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 HMG20AQ9NP66 347 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 ACOT9Q9Y305 439 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 AGRPO00253 132 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 RAD51BO15315 384 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 GRAP2O75791 330 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 BCAS2O75934 225 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 MT-CO1P00395 513 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 COX4I1P13073 169 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SLC5A3P53794 718 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 TRAP1Q12931 704 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 KIAA0930Q6ICG6 404 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SLC27A1Q6PCB7 646 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 FRA10AC1Q70Z53 315 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 EFL1Q7Z2Z2 1120 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 HM13Q8TCT9 377 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PHF21AQ96BD5 680 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SEPHS2Q99611 448 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 NPHS1O60500 1241 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 INHBCP55103 352 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 RAB14P61106 215 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PLIN5Q00G26 463 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 OTUD3Q5T2D3 398 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 ARMC4Q5T2S8 1044 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 RBM12BQ8IXT5 1001 aaKnown RBP5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PARP8Q8N3A8 854 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SEPT8Q92599 483 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 RBBP8Q99708 897 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 PIF1Q9H611 641 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 TMEM9Q9P0T7 183 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 RPS6KL1Q9Y6S9 549 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 A0A088AWK7 358 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 MAP3K13O43283 966 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 C2P06681 752 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 C8BP07358 591 aa5.51□□□□□ -1.53
PTPRD-205ENST00000397611 CYP2F1P24903 491 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms