RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DMC1Q14565 340 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 IHHQ14623 411 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 BBS9Q3SYG4 887 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 INO80DQ53TQ3 878 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 PPP1R21Q6ZMI0 780 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 TMC3Q7Z5M5 1100 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 HNRNPLLQ8WVV9 542 aaKnown RBP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.49■■□□□ 1.033e-13■■■■■ 108.9
CPNE1-204ENST00000397443 FSD1LQ9BXM9 530 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 NOD2Q9HC29 1040 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 SCUBE2Q9NQ36 999 aa21.49■■□□□ 1.03
CPNE1-204ENST00000397443 AAR2Q9Y312 384 aaKnown RBP21.49■■□□□ 1.03
CPNE1-204ENST00000397443 GOLGA6CA6NDK9 693 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 GOLGA6BA6NDN3 693 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 AGTP01019 485 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 GOLGA6DP0CG33 693 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 GEMP55040 296 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 SULT2A1Q06520 285 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 FASTKD3Q14CZ7 662 aaKnown RBP21.48■■□□□ 1.03
CPNE1-204ENST00000397443 KIAA0907Q7Z7F0 614 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-204ENST00000397443 CAND1Q86VP6 1230 aaKnown RBP21.48■■□□□ 1.03
CPNE1-204ENST00000397443 PDIK1LQ8N165 341 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 PLCD3Q8N3E9 789 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 SLC44A3Q8N4M1 653 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 OR52K1Q8NGK4 314 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 MAFAQ8NHW3 353 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-204ENST00000397443 FICDQ9BVA6 458 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 EIF2B3Q9NR50 452 aaKnown RBP21.48■■□□□ 1.03
CPNE1-204ENST00000397443 HAUS2Q9NVX0 235 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 GOLGA6AQ9NYA3 693 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 SLC27A6Q9Y2P4 619 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 F5P12259 2224 aa21.48■■□□□ 1.03
CPNE1-204ENST00000397443 TBC1D3BA6NDS4 549 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 SESN2P58004 480 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-204ENST00000397443 DGKKQ5KSL6 1271 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 DENND2CQ68D51 928 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 KCTD11Q693B1 232 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ZNF534Q76KX8 674 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ANKMY2Q8IV38 441 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 RYBPQ8N488 228 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-204ENST00000397443 DNAAF3Q8N9W5 541 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 CAVIN3Q969G5 261 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 LRRC40Q9H9A6 602 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ERVW-1Q9UQF0 538 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 SMAPO00193 183 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 WNT3AP56704 352 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 SARNPP82979 210 aaKnown RBP21.47■■□□□ 1.03
CPNE1-204ENST00000397443 SKOR1P84550 965 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 UBAP2Q5T6F2 1119 aaKnown RBP21.47■■□□□ 1.03
CPNE1-204ENST00000397443 CENPUQ71F23 418 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ZBED8Q8IZ13 594 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 SH2D3CQ8N5H7 860 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 TTC17Q96AE7 1141 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 C9orf72Q96LT7 481 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 NSMCE3Q96MG7 304 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ZDHHC4Q9NPG8 344 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ELOVL2Q9NXB9 296 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 HS3ST2Q9Y278 367 aa21.47■■□□□ 1.03
CPNE1-204ENST00000397443 ANTXRLA6NF34 631 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 INSIG1O15503 277 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 SLC20A2Q08357 652 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 DLG2Q15700 870 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 CAPN12Q6ZSI9 719 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 SLC25A41Q8N5S1 370 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 ZNF366Q8N895 744 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 TERB1Q8NA31 727 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 MCUQ8NE86 351 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 WFIKKN2Q8TEU8 576 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 UBLCP1Q8WVY7 318 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-204ENST00000397443 MRGPRX2Q96LB1 330 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 TBL1YQ9BQ87 522 aa21.46■■□□□ 1.03
CPNE1-204ENST00000397443 FBRSL1Q9HCM7 1045 aaKnown RBP21.46■■□□□ 1.03
CPNE1-204ENST00000397443 ERI2A8K979 691 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 ATP5BP06576 529 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 SERPINF2P08697 491 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 GKP32189 559 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CRADDP78560 199 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CDK16Q00536 496 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 MPP3Q13368 585 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 C22orf39Q6P5X5 142 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 KDELC1Q6UW63 502 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 SEMA4AQ9H3S1 761 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 EVLQ9UI08 416 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 TTC34A8MYJ7 566 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 NARSO43776 548 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 ZNF821O75541 412 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 KAT7O95251 611 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 DLDP09622 509 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 TPH1P17752 444 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CR2P20023 1033 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 HSPA9P38646 679 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CHRNA4P43681 627 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 PMS2P54278 862 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 NAPEPLDQ6IQ20 393 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 Q6ZVU0 165 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 MPP5Q8N3R9 675 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 PDCD6IPQ8WUM4 868 aaKnown RBP21.45■■□□□ 1.02
CPNE1-204ENST00000397443 MRGPRX3Q96LB0 322 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 NUDCD1Q96RS6 583 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CDC42EP4Q9H3Q1 356 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms