RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SLC41A1Q8IVJ1 513 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 RNF10Q8N5U6 811 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 EXD1Q8NHP7 514 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 ARRDC3Q96B67 414 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 RBM41Q96IZ5 413 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 PDLIM2Q96JY6 352 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF830Q96NB3 372 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 ARRDC1-AS1Q9H2J1 176 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 DYRK4Q9NR20 520 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 DTLQ9NZJ0 730 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 EVLQ9UI08 416 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 PCDHA3Q9Y5H8 950 aa21.51■■□□□ 1.03
TSPAN4-206ENST00000397408 CCDC66A2RUB6 948 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 FAM47DPA6NHR8 397 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 POP4O95707 220 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 FTCDO95954 541 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 KRT10P13645 584 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 ZFXP17010 805 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 MX2P20592 715 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 ADPRHP54922 357 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 SLC10A7Q0GE19 358 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 SLC10A2Q12908 348 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 TAZQ16635 292 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 TFDP3Q5H9I0 405 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 KAZNQ674X7 775 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 RCOR2Q8IZ40 523 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 TSEN2Q8NCE0 465 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 NSMCE1Q8WV22 266 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 FOXJ1Q92949 421 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 PPP1R16AQ96I34 528 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 C6orf106Q9H6K1 298 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 LZTFL1Q9NQ48 299 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 SEPT3Q9UH03 358 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 AMFRQ9UKV5 643 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 PCDHGA5Q9Y5G8 931 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 HEY1Q9Y5J3 304 aa21.5■■□□□ 1.03
TSPAN4-206ENST00000397408 MEI4A8MW99 385 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 UGT2B4P06133 528 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 MPLP40238 635 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 RGRP47804 291 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 RAD51Q06609 339 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF235Q14590 738 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 AGBL4Q5VU57 503 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 NPNTQ6UXI9 565 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 CADM4Q8NFZ8 388 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 OR14C36Q8NHC7 312 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 FAM131CQ96AQ9 280 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF419Q96HQ0 510 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 LRIG1Q96JA1 1093 aa21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 PACSIN2Q9UNF0 486 aaPredicted RBP21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 TNRC6BQ9UPQ9 1833 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 ATXN2Q99700 1313 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-206ENST00000397408 hCG_1818297A0A087WSY0 165 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 BCLAF3A2AJT9 711 aaKnown RBP21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 MUSKO15146 869 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 INSIG1O15503 277 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 SLC7A4O43246 635 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 ITPKAP23677 461 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 ITGB7P26010 798 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 RWDD2BP57060 319 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 SPEM2Q0P670 501 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 TFDP2Q14188 446 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 CCDC6Q16204 474 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 TIGD7Q6NT04 549 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 NCEH1Q6PIU2 408 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 LRRN4Q8WUT4 740 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 PIGKQ92643 395 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 ALG3Q92685 438 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 VOPP1Q96AW1 172 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 PSKH2Q96QS6 385 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 OSBPL1AQ9BXW6 950 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 PCED1AQ9H1Q7 454 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 PPP2R2CQ9Y2T4 447 aa21.48■■□□□ 1.03
TSPAN4-206ENST00000397408 LRRC72A6NJI9 287 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 METTL12A8MUP2 240 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 CST8O60676 142 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 PEX5P50542 639 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 PPP2R5EQ16537 467 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 PIP5KL1Q5T9C9 394 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 DCAF12L1Q5VU92 463 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF662Q6ZS27 426 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 ERN2Q76MJ5 926 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 PARS2Q7L3T8 475 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 BBS5Q8N3I7 341 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 CCNYQ8ND76 341 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 OR2T34Q8NGX1 318 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 SNX19Q92543 992 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 HDAC11Q96DB2 347 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 HDAC8Q9BY41 377 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 RALGAPA1Q6GYQ0 2036 aa21.47■■□□□ 1.03
TSPAN4-206ENST00000397408 MIF4GDA9UHW6 222 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 PLRG1O43660 514 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 FSBPO95073 299 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 PIGNO95427 931 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MMP13P45452 471 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 RENBPP51606 427 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 NEK3P51956 506 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 ADCY2Q08462 1091 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF805Q5CZA5 627 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms