RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TRDMT1O14717 391 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 SEPT4O43236 478 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 CETPP11597 493 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FAUP35544 74 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 CASP5P51878 434 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 CAPZA1P52907 286 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 VPS72Q15906 364 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 SPESP1Q6UW49 350 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 BEND4Q6ZU67 534 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 HTRA1Q92743 480 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 GFM1Q96RP9 751 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 MOCS1Q9NZB8 636 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 MLXQ9UH92 298 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 VIL1P09327 827 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 KLRC1P26715 233 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 HKDC1Q2TB90 917 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 GXYLT1Q4G148 440 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 SAMD4BQ5PRF9 694 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 ALG1LQ6GMV1 187 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 METTL16Q86W50 562 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 RNF121Q9H920 327 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FKBP6O75344 327 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 ADCY4Q8NFM4 1077 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 RP9Q8TA86 221 aaKnown RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 HIST1H2AAQ96QV6 131 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FAIM2Q9BWQ8 316 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 SLC6A15Q9H2J7 730 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 ZNF226Q9NYT6 803 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 SNCAIPQ9Y6H5 919 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 COL17A1Q9UMD9 1497 aaPredicted RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 PEX11AO75192 247 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 USP12O75317 370 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 PGAM2P15259 253 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ADIGQ0VDE8 80 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 NAB1Q13506 487 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 PIH1D2Q8WWB5 315 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ZHX1-C8orf76Q96EF9 292 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 C1GALT1C1Q96EU7 318 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ADAM7Q9H2U9 754 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 BAIAP2Q9UQB8 552 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FSHRP23945 695 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 CXCR2P25025 360 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 UQCRC1P31930 480 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 RENBPP51606 427 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 BCAT1P54687 386 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ARMC12Q5T9G4 340 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 FBXO16Q8IX29 292 aaPredicted RBP12.45□□□□□ -0.42
SMU1-201ENST00000397149 SLC34A3Q8N130 599 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 CADM2Q8N3J6 435 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 QRFPRQ96P65 431 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 OSMRQ99650 979 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
SMU1-201ENST00000397149 ZMPSTE24O75844 475 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 DNTTP04053 509 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 GRIA3P42263 894 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 FMR1Q06787 632 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMU1-201ENST00000397149 POLNQ7Z5Q5 900 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 COQ8BQ96D53 544 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 TAAR1Q96RJ0 339 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 NDUFB10O96000 172 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 FDX1P10109 184 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 PRKCHP24723 683 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 GTF2IRD2BQ6EKJ0 949 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 LRRC69Q6ZNQ3 347 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 USP45Q70EL2 814 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 GTF2IRD2Q86UP8 949 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 MCMBPQ9BTE3 642 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D10AQ9BXI6 508 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 FAM126AQ9BYI3 521 aaPredicted RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 CCDC86Q9H6F5 360 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 NMRAL1Q9HBL8 299 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 SNTG2Q9NY99 539 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 LOC110117498-PIK3R3F6TDL0 507 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 H3BNH8 94 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 CYB5AP00167 134 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 KCNJ5P48544 419 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 CES5AQ6NT32 575 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 DNAAF5Q86Y56 855 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 THRSPQ92748 146 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 CDHR5Q9HBB8 845 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 SMURF1Q9HCE7 757 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 UCKL1Q9NWZ5 548 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 OSER1Q9NX31 292 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms