RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SETD7Q8WTS6 366 aaKnown RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 TNKS2Q9H2K2 1166 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 LRRC19Q9H756 370 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 IL21RQ9HBE5 538 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 ARHGAP20Q9P2F6 1191 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 MYO1AQ9UBC5 1043 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 FCF1Q9Y324 198 aaKnown RBP14.18□□□□□ -0.14
SEC13-204ENST00000397099 MFHAS1Q9Y4C4 1052 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
SEC13-204ENST00000397099 TMEM131Q92545 1883 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 SSU72P8A0A1W2PR75 194 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 MYO1FO00160 1098 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 TLR4O00206 839 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 TSPAN6O43657 245 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 ADRB3P13945 408 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 CASP14P31944 242 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 ARL4AP40617 200 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 GRK6P43250 576 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 FAM193AP78312 1265 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 TRIP6Q15654 476 aaKnown RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 MYLK3Q32MK0 819 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 ZNF805Q5CZA5 627 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 RFX8Q6ZV50 586 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 CHST14Q8NCH0 376 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 GRIN3AQ8TCU5 1115 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 TEKT4Q8WW24 435 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 SLC6A18Q96N87 628 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 ELF4Q99607 663 aaPredicted RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 DNAJC7Q99615 494 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 SNRNP25Q9BV90 132 aaKnown RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 CPEB1Q9BZB8 566 aaKnown RBP14.17□□□□□ -0.14
SEC13-204ENST00000397099 ZDHHC6Q9H6R6 413 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 UVRAGQ9P2Y5 699 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 PCSK1NQ9UHG2 260 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 WASF3Q9UPY6 502 aa14.17□□□□□ -0.14
SEC13-204ENST00000397099 FRYQ5TBA9 3013 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 TRPM6Q9BX84 2022 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 A0A087X0T9 212 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 A0A1B0GTQ1 180 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 A0A1W2PR77 199 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 H3BRJ5 948 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 TMCC1O94876 653 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 CYP1A2P05177 515 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 FAM228BP0C875 321 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 HNRNPA2B1P22626 353 aaKnown RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 AKT2P31751 481 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 TAS2R38P59533 333 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 RHOAP61586 193 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 PPP2CBP62714 309 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 PPP2CAP67775 309 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 DPYSL2Q16555 572 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 SLC18A3Q16572 532 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 HADHQ16836 314 aaKnown RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 PPP6R3Q5H9R7 873 aaPredicted RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 CCDC122Q5T0U0 273 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 DNAAF5Q86Y56 855 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 ARFGAP1Q8N6T3 406 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 ASB12Q8WXK4 309 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 ARRDC3Q96B67 414 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 HMCESQ96FZ2 354 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 ANP32EQ9BTT0 268 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 MAGEB5Q9BZ81 275 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 TM6SF2Q9BZW4 377 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 THAP2Q9H0W7 228 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 DEF6Q9H4E7 631 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 NOL6Q9H6R4 1146 aaKnown RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 RCOR3Q9P2K3 495 aaPredicted RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 UBA2Q9UBT2 640 aaPredicted RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 KLK13Q9UKR3 277 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 APOBEC2Q9Y235 224 aaKnown RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 FNDC3AQ9Y2H6 1198 aaKnown RBP14.16□□□□□ -0.14
SEC13-204ENST00000397099 SLCO1B1Q9Y6L6 691 aa14.16□□□□□ -0.14
SEC13-204ENST00000397099 A0A1W2PQU0 124 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 KRIT1O00522 736 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 PRAMEF11O60813 436 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 PCDH8O95206 1070 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 H2AFZP0C0S5 128 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 SERPINB6P35237 376 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 RXRGP48443 463 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 METAP1P53582 386 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 NXPH1P58417 271 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
SEC13-204ENST00000397099 POM121L1PQ3SYA9 428 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 LAYNQ6UX15 382 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 GDPD4Q6W3E5 623 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 H2AFVQ71UI9 128 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 LRRC49Q8IUZ0 686 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 CHCHD4Q8N4Q1 142 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 CTNNBL1Q8WYA6 563 aaPredicted RBP14.15□□□□□ -0.14
SEC13-204ENST00000397099 ZNF599Q96NL3 588 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 NUP85Q9BW27 656 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms