RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PCDHA3Q9Y5H8 950 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 GRM6O15303 877 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 IDH3BO43837 385 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 ALPPL2P10696 532 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 TSPAN8P19075 237 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 SEC24CP53992 1094 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 RACGAP1Q9H0H5 632 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 SELPP16109 830 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 PIK3CGP48736 1102 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 ZNF571Q7Z3V5 609 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-208ENST00000397030 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 EPB41L4BQ9H329 900 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 DEC1Q9P2X7 70 aa17.61■□□□□ 0.41
MCF2L-208ENST00000397030 MRPS17Q9Y2R5 130 aaKnown RBP17.61■□□□□ 0.41
MCF2L-208ENST00000397030 KRT75O95678 551 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 MIPP30301 263 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 ADSLP30566 484 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 NR2C2P49116 596 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 CYP2R1Q6VVX0 501 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 SCUBE1Q8IWY4 988 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 UBE2E3Q969T4 207 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 SIKE1Q9BRV8 207 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 NAT9Q9BTE0 207 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TNFSF9P41273 254 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 NDUFAF6Q330K2 333 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 SCIMPQ6UWF3 145 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 ZCCHC23Q6ZST2 131 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 OTOP1Q7RTM1 612 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 OR52K1Q8NGK4 314 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 LENG1Q96BZ8 264 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 FGF10O15520 208 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 FGF19O95750 216 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 MAPK10P53779 464 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 KLHL12Q53G59 568 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 ZNF605Q86T29 641 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 MCCC1Q96RQ3 725 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 KIAA1522Q9P206 1035 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 CPS1P31327 1500 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 USP31Q70CQ4 1352 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TLR5O60602 858 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 PDX1P52945 283 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 COLEC12Q5KU26 742 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 STXBP5Q5T5C0 1151 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 MTDHQ86UE4 582 aaKnown RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 RNF148Q8N7C7 305 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TSPAN14Q8NG11 270 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TMEM237Q96Q45 408 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 PRODHO43272 600 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TCEA3O75764 348 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 RBL1P28749 1068 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 DGKEP52429 567 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 RASA2Q15283 850 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 PAGE2Q7Z2X7 111 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 FBXO30Q8TB52 745 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
MCF2L-208ENST00000397030 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
MCF2L-208ENST00000397030 STBD1O95210 358 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 GNSP15586 552 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 CDH3P22223 829 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-208ENST00000397030 HPS6Q86YV9 775 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 TNKS2Q9H2K2 1166 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 MYO3AQ8NEV4 1616 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 CPED1A4D0V7 1026 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SLCO1B7G3V0H7 640 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 PIK3CDO00329 1044 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 NOS2P35228 1153 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 OR4A15Q8NGL6 344 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 HERVK_113Q902F9 699 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 WNT8BQ93098 351 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 COQ7Q99807 217 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SEMA3CQ99985 751 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 A0A1W2PQH9 124 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 KELP23276 732 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SLC5A5Q92911 643 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 TRNT1Q96Q11 434 aaKnown RBP17.59■□□□□ 0.41
MCF2L-208ENST00000397030 IL12RB2Q99665 862 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 TMEM79Q9BSE2 394 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 ASGR1P07306 291 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 HSPA13P48723 471 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 CCDC153Q494R4 210 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 AFTPHQ6ULP2 937 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 GAL3ST4Q96RP7 486 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SLC38A3Q99624 504 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 MCMBPQ9BTE3 642 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 ATAD3AQ9NVI7 634 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 AGO1Q9UL18 857 aaKnown RBP17.59■□□□□ 0.41
MCF2L-208ENST00000397030 ERVK-11Q9UQG0 969 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 ANKRD6Q9Y2G4 727 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 PER2O15055 1255 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 DCLK1O15075 740 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 MAGEC1O60732 1142 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-208ENST00000397030 KLHL17Q6TDP4 642 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SPATA6LQ8N4H0 392 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 SETD7Q8WTS6 366 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms