RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 KCNA5P22460 613 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 SCNN1BP51168 640 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 SESN2P58004 480 aaPredicted RBP20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 RHOAP61586 193 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 FAM193AP78312 1265 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC20A2Q08357 652 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 CCDC38Q502W7 563 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 KDELC1Q6UW63 502 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 METTL3Q86U44 580 aaKnown RBP20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 IQCKQ8N0W5 287 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 LRRC39Q96DD0 335 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 MRGPRX2Q96LB1 330 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 RUFY1Q96T51 708 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 CASS4Q9NQ75 786 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 EPS15L1Q9UBC2 864 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC25A13Q9UJS0 675 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 TEX264Q9Y6I9 313 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 KIAA1549LQ6ZVL6 1849 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 SZT2Q5T011 3432 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 COL4A3Q01955 1670 aa20.7■□□□□ 0.9
VCPKMT-202ENST00000395860 CXorf51AA0A1B0GTR3 108 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 OTOL1A6NHN0 477 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 AP3B1O00203 1094 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 TRIM24O15164 1050 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 GJB3O75712 270 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 AGTP01019 485 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 GDI1P31150 447 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 RGRP47804 291 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 WNT3AP56704 352 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SKOR1P84550 965 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SULT2A1Q06520 285 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 RUNX3Q13761 415 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 Q7L0L9 218 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 KIAA0907Q7Z7F0 614 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 C12orf40Q86WS4 652 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 PALM2Q8IXS6 379 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 ATP11CQ8NB49 1132 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CDX2Q99626 313 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 UBE2ZQ9H832 354 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SCUBE2Q9NQ36 999 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 C5orf42Q9H799 3197 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 GRXCR2A6NFK2 248 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SDR42E2A6NKP2 422 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 K7ERQ8 282 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 TULP3O75386 442 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CPP00450 1065 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SERPINF2P08697 491 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 POLR2EP19388 210 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CR2P20023 1033 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CES1P23141 567 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CTSOP43234 321 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 CDH17Q12864 832 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 MBLAC2Q68D91 279 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 KDELC2Q7Z4H8 507 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 ADIPOR2Q86V24 386 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 RNF135Q8IUD6 432 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 AGGF1Q8N302 714 aaeCLIP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 UHMK1Q8TAS1 419 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 TADA1Q96BN2 335 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 ZBTB9Q96C00 473 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 RPL10LQ96L21 214 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 SIGLEC10Q96LC7 697 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 NUDCD1Q96RS6 583 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 WDR83Q9BRX9 315 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 TRMT61BQ9BVS5 477 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 VPS37BQ9H9H4 285 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 LRRC4CQ9HCJ2 640 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 LHX3Q9UBR4 397 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 MAD1L1Q9Y6D9 718 aa20.69■□□□□ 0.9
VCPKMT-202ENST00000395860 INSIG1O15503 277 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 SMAD6O43541 496 aaKnown RBP20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 CISD3P0C7P0 127 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 MGAT1P26572 445 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 ADRA1AP35348 466 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 ECT2LQ008S8 904 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 NSUN2Q08J23 767 aaKnown RBP eCLIP20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 GEN1Q17RS7 908 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 CAPN12Q6ZSI9 719 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 IGDCC3Q8IVU1 814 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 ETFBKMTQ8IXQ9 262 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 MPP5Q8N3R9 675 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 RPP25Q9BUL9 199 aaKnown RBP20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 NOD2Q9HC29 1040 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 GTSE1Q9NYZ3 720 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 BFARQ9NZS9 450 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 NUMBLQ9Y6R0 609 aa20.68■□□□□ 0.9
VCPKMT-202ENST00000395860 NUDT17P0C025 328 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 STK19P49842 368 aaPredicted RBP20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SMAD4Q13485 552 aaKnown RBP20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 IHHQ14623 411 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 GAB4Q2WGN9 574 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 CASC4Q6P4E1 433 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 OR2W6PQ8NHA6 318 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 TTC8Q8TAM2 541 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 WFIKKN2Q8TEU8 576 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 DEC1Q9P2X7 70 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 HS3ST2Q9Y278 367 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC27A6Q9Y2P4 619 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 MYLKQ15746 1914 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms