RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 GPSM3Q9Y4H4 160 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 LRRK1Q38SD2 2015 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CELSR3Q9NYQ7 3312 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CXorf51AA0A1B0GTR3 108 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 TEX33O43247 280 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 RAMP2O60895 175 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 GIMD1P0DJR0 217 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 ETFBP38117 255 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 TYRO3Q06418 890 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CYP4F3Q08477 520 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CCDC15Q0P6D6 951 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 PROX2Q3B8N5 592 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CCDC183Q5T5S1 534 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 ATXN7L2Q5T6C5 722 aaPredicted RBP18.34■□□□□ 0.53
CXCL12-204ENST00000395793 DNAJC24Q6P3W2 148 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 SLFN11Q7Z7L1 901 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 PLPP6Q8IY26 295 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 CALN1Q9BXU9 219 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 GPR27Q9NS67 375 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 KLHL11Q9NVR0 708 aa18.34■□□□□ 0.53
CXCL12-204ENST00000395793 POM121BA6NF01 834 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 C16orf96A6NNT2 1141 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 SIGLEC6O43699 453 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 AP1G1O43747 822 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 GSRP00390 522 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 HOXB3P14651 431 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF143P52747 638 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 POLD3Q15054 466 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 FBXL19Q6PCT2 694 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 C19orf48Q6RUI8 117 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 IRF2BP2Q7Z5L9 587 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 TMPRSS12Q86WS5 348 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 MCOLN2Q8IZK6 566 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 RTL3Q8N8U3 475 aaKnown RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 OR2AP1Q8NGE2 309 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 KLF6Q99612 283 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-204ENST00000395793 RETREG1Q9H6L5 497 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 FZD10Q9ULW2 581 aa18.33■□□□□ 0.52
CXCL12-204ENST00000395793 URB1O60287 2271 aaKnown RBP18.32■□□□□ 0.52
CXCL12-204ENST00000395793 A6NNZ2 444 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 KRIT1O00522 736 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 KDELR3O43731 214 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 TMCC1O94876 653 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 PAK4O96013 591 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-204ENST00000395793 C1SP09871 688 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 DGKAP23743 735 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 RPS21P63220 83 aaKnown RBP18.32■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF542PQ5EBM4 170 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 TPRG1LQ5T0D9 272 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 HES3Q5TGS1 186 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 KIAA1161Q6NSJ0 714 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 PTAR1Q7Z6K3 402 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-204ENST00000395793 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 RYBPQ8N488 228 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-204ENST00000395793 HMCESQ96FZ2 354 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 SLC17A9Q9BYT1 436 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 LAMA5O15230 3695 aa18.32■□□□□ 0.52
CXCL12-204ENST00000395793 IGLON5A6NGN9 336 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 PIAS2O75928 621 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 UGT2B4P06133 528 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 FERP16591 822 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 CKMT2P17540 419 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 EPHB2P29323 1055 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 GEMIN4P57678 1058 aaKnown RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 MYLK3Q32MK0 819 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 ANO6Q4KMQ2 910 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF805Q5CZA5 627 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 EFHC2Q5JST6 749 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 LRRC73Q5JTD7 316 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 E4F1Q66K89 784 aaPredicted RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 ACAD10Q6JQN1 1059 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 KYAT3Q6YP21 454 aaKnown RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 Q6ZSR6 202 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 OR4C6Q8NH72 309 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 KLHL32Q96NJ5 620 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 CNPY3Q9BT09 278 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 C1QTNF2Q9BXJ5 285 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 RTN4Q9NQC3 1192 aaKnown RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 GPATCH2LQ9NWQ4 482 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 HS3ST3A1Q9Y663 406 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 ANKRD36A6QL64 1941 aa18.31■□□□□ 0.52
CXCL12-204ENST00000395793 COL27A1Q8IZC6 1860 aaPredicted RBP18.31■□□□□ 0.52
CXCL12-204ENST00000395793 RASA4BC9J798 803 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 FFAR2O15552 330 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
CXCL12-204ENST00000395793 RASA4O43374 803 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 BUB1O43683 1085 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 CREB3O43889 395 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 MBD3O95983 291 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 JUPP14923 745 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 ACP1P24666 158 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 SNRPD1P62314 119 aaKnown RBP18.3■□□□□ 0.52
CXCL12-204ENST00000395793 FZD2Q14332 565 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 COL28A1Q2UY09 1125 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms