RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 EPN2O95208 641 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 POP4O95707 220 aaKnown RBP16.8■□□□□ 0.28
CXCL1-201ENST00000395761 FTCDO95954 541 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 PRNPP04156 253 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 CTNNA2P26232 953 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
CXCL1-201ENST00000395761 PEX5P50542 639 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 CCDC6Q16204 474 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 TSEN2Q8NCE0 465 aaKnown RBP16.8■□□□□ 0.28
CXCL1-201ENST00000395761 EXD1Q8NHP7 514 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.8■□□□□ 0.28
CXCL1-201ENST00000395761 RUBCNQ92622 972 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 GDAP1L1Q96MZ0 367 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 PACSIN2Q9UNF0 486 aaPredicted RBP16.8■□□□□ 0.28
CXCL1-201ENST00000395761 HEY1Q9Y5J3 304 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 OTOGLQ3ZCN5 2332 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 THADAQ6YHU6 1953 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 APOL1O14791 398 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 GJB3O75712 270 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SEMA4FO95754 770 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 ITPKAP23677 461 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 DYNLT1P63172 113 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 CREB5Q02930 508 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 ZNF33AQ06730 810 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
CXCL1-201ENST00000395761 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
CXCL1-201ENST00000395761 LBRQ14739 615 aaKnown RBP16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SPDYCQ5MJ68 293 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 TMCO4Q5TGY1 634 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 AGBL4Q5VU57 503 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 LYSMD4Q5XG99 296 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 KAZNQ674X7 775 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 PEX26Q7Z412 305 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 LRRC49Q8IUZ0 686 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 CCDC50Q8IVM0 306 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 TRIM58Q8NG06 486 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 ALG3Q92685 438 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 FAM131CQ96AQ9 280 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 HINFPQ9BQA5 517 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 CINPQ9BW66 212 aaPredicted RBP16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 TMEM74BQ9NUR3 256 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 AMFRQ9UKV5 643 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 FZD4Q9ULV1 537 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 NUMA1Q14980 2115 aa16.79■□□□□ 0.28
CXCL1-201ENST00000395761 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 hCG_1818297A0A087WSY0 165 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 TTC24A2A3L6 582 aaPredicted RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 BCLAF3A2AJT9 711 aaKnown RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 FAM47DPA6NHR8 397 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 METTL12A8MUP2 240 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 CST8O60676 142 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 IGSF6O95976 241 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 TGM1P22735 817 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 MAOBP27338 520 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 ADPRHP54922 357 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 SPEM2Q0P670 501 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 PIP5KL1Q5T9C9 394 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 AADACL2Q6P093 401 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 C17orf53Q8N3J3 647 aaPredicted RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 PGBD5Q8N414 524 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 CADM4Q8NFZ8 388 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 OR14C36Q8NHC7 312 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 PIGKQ92643 395 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 NSMCE3Q96MG7 304 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 TSGA13Q96PP4 275 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 PSKH2Q96QS6 385 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 LGMNQ99538 433 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 HERPUD2Q9BSE4 406 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 HEMGNQ9BXL5 484 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 SMOC1Q9H4F8 434 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 PARD6AQ9NPB6 346 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 SAE1Q9UBE0 346 aaPredicted RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 SEPT3Q9UH03 358 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 EP300Q09472 2414 aaPredicted RBP16.78■□□□□ 0.28
CXCL1-201ENST00000395761 FRYLO94915 3013 aa16.78■□□□□ 0.28
CXCL1-201ENST00000395761 CCDC66A2RUB6 948 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 KIF5CO60282 957 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 PIGNO95427 931 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 UGT2B4P06133 528 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 PYGMP11217 842 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 ZFXP17010 805 aaPredicted RBP16.77■□□□□ 0.28
CXCL1-201ENST00000395761 MX2P20592 715 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 CCNCP24863 283 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 RWDD2BP57060 319 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 TAS2R38P59533 333 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 TFDP2Q14188 446 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 TFDP3Q5H9I0 405 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 FAM182AQ5T1J6 154 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 MARC1Q5VT66 337 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 DCAF12L1Q5VU92 463 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 NCEH1Q6PIU2 408 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 GDPD4Q6W3E5 623 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 ERN2Q76MJ5 926 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms