RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DCLK2Q8N568 766 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 ZNF419Q96HQ0 510 aaPredicted RBP20.21■□□□□ 0.83
SNCA-203ENST00000394986 HSPA12BQ96MM6 686 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 HEMGNQ9BXL5 484 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 C6orf106Q9H6K1 298 aaPredicted RBP20.21■□□□□ 0.83
SNCA-203ENST00000394986 NCDNQ9UBB6 729 aa20.21■□□□□ 0.83
SNCA-203ENST00000394986 SAE1Q9UBE0 346 aaPredicted RBP20.21■□□□□ 0.83
SNCA-203ENST00000394986 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
SNCA-203ENST00000394986 TTC24A2A3L6 582 aaPredicted RBP20.2■□□□□ 0.82
SNCA-203ENST00000394986 FAM47DPA6NHR8 397 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 DDX3YO15523 660 aaKnown RBP20.2■□□□□ 0.82
SNCA-203ENST00000394986 CST8O60676 142 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 SEMA4FO95754 770 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 UGT2B4P06133 528 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 RWDD2BP57060 319 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 ZNF235Q14590 738 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 RFTN1Q14699 578 aaPredicted RBP20.2■□□□□ 0.82
SNCA-203ENST00000394986 TFDP3Q5H9I0 405 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 B4GALNT4Q76KP1 1039 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 PLPP6Q8IY26 295 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 HAUS1Q96CS2 278 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 ZNF599Q96NL3 588 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 LGMNQ99538 433 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 HINFPQ9BQA5 517 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 ARRDC1-AS1Q9H2J1 176 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 GMEB2Q9UKD1 530 aa20.2■□□□□ 0.82
SNCA-203ENST00000394986 EPN2O95208 641 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PIGNO95427 931 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 POP4O95707 220 aaKnown RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 PECAM1P16284 738 aaPredicted RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 CREB5Q02930 508 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ZNF33AQ06730 810 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ZNF211Q13398 564 aaPredicted RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 TFDP2Q14188 446 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 AGBL4Q5VU57 503 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ZNF662Q6ZS27 426 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ALYREFQ86V81 257 aaKnown RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 PGBD5Q8N414 524 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 CCNYQ8ND76 341 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 OR14C36Q8NHC7 312 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 SGK2Q9HBY8 427 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 SEPT3Q9UH03 358 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 FZD4Q9ULV1 537 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ABCA7Q8IZY2 2146 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PLXND1Q9Y4D7 1925 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 RETP07949 1114 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PYGMP11217 842 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ZFXP17010 805 aaPredicted RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 MX2P20592 715 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ITPKAP23677 461 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 ADPRHP54922 357 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PPP2R5EQ16537 467 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PIP5KL1Q5T9C9 394 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 LYSMD4Q5XG99 296 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 NCEH1Q6PIU2 408 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PARS2Q7L3T8 475 aaKnown RBP20.19■□□□□ 0.82
SNCA-203ENST00000394986 LRRC49Q8IUZ0 686 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 RUBCNQ92622 972 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 NSMCE3Q96MG7 304 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 OLFM3Q96PB7 478 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 PSKH2Q96QS6 385 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 SMOC1Q9H4F8 434 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 DYRK4Q9NR20 520 aa20.19■□□□□ 0.82
SNCA-203ENST00000394986 SDK1Q7Z5N4 2213 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 MAOBP27338 520 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 MMP13P45452 471 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 MAXP61244 160 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 SFSWAPQ12872 951 aaKnown RBP20.18■□□□□ 0.82
SNCA-203ENST00000394986 MARC1Q5VT66 337 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 DCAF12L1Q5VU92 463 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 CYP2U1Q7Z449 544 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 SRLQ86TD4 932 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 UBL4BQ8N7F7 174 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 NSMCE1Q8WV22 266 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 PIGKQ92643 395 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 FAM131CQ96AQ9 280 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 HDAC11Q96DB2 347 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 HES6Q96HZ4 224 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 PPP1R16AQ96I34 528 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 LOXL4Q96JB6 756 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 KLHL32Q96NJ5 620 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 TSGA13Q96PP4 275 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 NT5MQ9NPB1 228 aa20.18■□□□□ 0.82
SNCA-203ENST00000394986 WDR87Q6ZQQ6 2873 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 OTOGLQ3ZCN5 2332 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 FRYLO94915 3013 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 BCLAF3A2AJT9 711 aaKnown RBP20.17■□□□□ 0.82
SNCA-203ENST00000394986 MEI4A8MW99 385 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 MIF4GDA9UHW6 222 aaKnown RBP20.17■□□□□ 0.82
SNCA-203ENST00000394986 KCNK1O00180 336 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 MATN3O15232 486 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 CCNCP24863 283 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 ITGB7P26010 798 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 SCNN1BP51168 640 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 TAS2R38P59533 333 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 RAD51Q06609 339 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 SPEM2Q0P670 501 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 LRRC73Q5JTD7 316 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 SPDYCQ5MJ68 293 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 GDPD4Q6W3E5 623 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 809.5 ms