RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 C1RP00736 705 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 APLP1P51693 650 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 CDK16Q00536 496 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 SPANXN3Q5MJ09 141 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 SCIMPQ6UWF3 145 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 OR13C4Q8NGS5 318 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 MTBPQ96DY7 904 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 PABPN1LA6NDY0 278 aaKnown RBP16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 STX7O15400 261 aaKnown RBP16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 PRPF4O43172 522 aaKnown RBP eCLIP16.09■□□□□ 0.172e-8■■■■■ 35.8
SMARCD1-202ENST00000394963 PIGNO95427 931 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 CATSPER2Q96P56 530 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 GCNAQ96QF7 691 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 CPNE1Q99829 537 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 OXCT2Q9BYC2 517 aaPredicted RBP16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 SCUBE2Q9NQ36 999 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.172e-10■■□□□ 13.5
SMARCD1-202ENST00000394963 HACD3Q9P035 362 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 SHROOM3Q8TF72 1996 aa16.09■□□□□ 0.17
SMARCD1-202ENST00000394963 C2orf78A6NCI8 922 aa16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 CD151P48509 253 aa16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 ATXN7L2Q5T6C5 722 aaPredicted RBP16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 RTL3Q8N8U3 475 aaKnown RBP16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 SLC26A7Q8TE54 656 aa16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 BTN2A3PQ96KV6 586 aa16.08■□□□□ 0.17
SMARCD1-202ENST00000394963 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 C9JVG2 144 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 TIMM44O43615 452 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 RTN3O95197 1032 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ALDOAP04075 364 aaKnown RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 CHRNGP07510 517 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 PRSS56P0CW18 603 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 TACR2P21452 398 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ELF3P78545 371 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 SLC25A3Q00325 362 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ELAVL2Q12926 359 aaKnown RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 PCID2Q5JVF3 399 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 BRMS1LQ5PSV4 323 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ZNF784Q8NCA9 323 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 SPPL2BQ8TCT7 592 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 NSL1Q96IY1 281 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ZNF558Q96NG5 402 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 SLC9A7Q96T83 725 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 TBC1D10AQ9BXI6 508 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 CYLDQ9NQC7 956 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 RCOR3Q9P2K3 495 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 FCF1Q9Y324 198 aaKnown RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 PRR5-ARHGAP8B1AHC4 643 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 RFPL1O75677 317 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 TUFMP49411 452 aaKnown RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 GLUD2P49448 558 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ARHGAP8P85298 464 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 CDC26Q8NHZ8 85 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 TNKS2Q9H2K2 1166 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 UBA2Q9UBT2 640 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 WDR81Q562E7 1941 aa16.08■□□□□ 0.16
SMARCD1-202ENST00000394963 XPAP23025 273 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 NPY2RP49146 381 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 EPHB3P54753 998 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 PAFAH1B3Q15102 231 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 SGO1Q5FBB7 561 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 ZNF534Q76KX8 674 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 NTAN1Q96AB6 310 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 DNAJC1Q96KC8 554 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 CIPCQ9C0C6 399 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 POLR1EQ9GZS1 481 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 SUPT3HB4E1H0 165 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 E7ESA3 106 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 MATN3O15232 486 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 CCL16O15467 120 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 SUPT3HO75486 399 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 TYMPP19971 482 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 RBM20Q5T481 1227 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 GRTP1Q5TC63 336 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 GLT6D1Q7Z4J2 308 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 TDRD5Q8NAT2 981 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 MYLIPQ8WY64 445 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 HOXA2O43364 376 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 SRP72O76094 671 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 TRIM16O95361 564 aa16.07■□□□□ 0.16
SMARCD1-202ENST00000394963 GUCA1CO95843 209 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms