RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PARP6Q2NL67 630 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 SDE2Q6IQ49 451 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 ZNF567Q8N184 647 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 FBXL6Q8N531 539 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 TRIB3Q96RU7 358 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.26
USP44-202ENST00000393091 PCED1AQ9H1Q7 454 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 ARNT2Q9HBZ2 717 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 GLOD4Q9HC38 313 aa13.46□□□□□ -0.26
USP44-202ENST00000393091 MYLKQ15746 1914 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 NDC80O14777 642 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 AP1G1O43747 822 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 KLF8O95600 359 aaPredicted RBP13.45□□□□□ -0.26
USP44-202ENST00000393091 HLA-DQB2P05538 268 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 DYNLT1P63172 113 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 SPATA4Q8NEY3 305 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 RPLP0P6Q8NHW5 317 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
USP44-202ENST00000393091 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 SGK1O00141 431 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 SMAPO00193 183 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 KRIT1O00522 736 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 STK10O94804 968 aaKnown RBP13.45□□□□□ -0.26
USP44-202ENST00000393091 ADRA1AP35348 466 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 FDFT1P37268 417 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
USP44-202ENST00000393091 MPP3Q13368 585 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 SEMA5AQ13591 1074 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 LRRK1Q38SD2 2015 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 FNDC3BQ53EP0 1204 aaKnown RBP13.45□□□□□ -0.26
USP44-202ENST00000393091 KDELC1Q6UW63 502 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 ATP11CQ8NB49 1132 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 CYB5D2Q8WUJ1 264 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 BHMTQ93088 406 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 FAM129AQ9BZQ8 928 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 CEP192Q8TEP8 1941 aa13.45□□□□□ -0.26
USP44-202ENST00000393091 LOC285095A0A1B0GVY8 99 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 FAM187AA6NFU0 413 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 RNF103O00237 685 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 PRNPP04156 253 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 ITGB7P26010 798 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 SFSWAPQ12872 951 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 SRPK1Q96SB4 655 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 HEPHQ9BQS7 1158 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 FOXQ1Q9C009 403 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 PAK5Q9P286 719 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 IL36AQ9UHA7 158 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 INSIG1O15503 277 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 COL9A1P20849 921 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 DRG2P55039 364 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 RPS14P62263 151 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 AP1B1Q10567 949 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 AGERQ15109 404 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 DARS2Q6PI48 645 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 WDR5BQ86VZ2 330 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 RUBCNQ92622 972 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 ACOX2Q99424 681 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 K7ERQ8 282 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 C5AR1P21730 350 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 CDK16Q00536 496 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 EMC10Q5UCC4 262 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 PRPF39Q86UA1 669 aaKnown RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 MAML2Q8IZL2 1156 aaPredicted RBP13.44□□□□□ -0.26
USP44-202ENST00000393091 CEP112Q8N8E3 955 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 DTX3LQ8TDB6 740 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 SORCS1Q8WY21 1168 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 RAB7BQ96AH8 199 aa13.44□□□□□ -0.26
USP44-202ENST00000393091 RBM22Q9NW64 420 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP44-202ENST00000393091 H7C0C1 242 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 SIN3BO75182 1162 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 CTSLP07711 333 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 ATP5OP48047 213 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 IHHQ14623 411 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 CCDC137Q6PK04 289 aaKnown RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 TXNDC5Q8NBS9 432 aaKnown RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 ASB12Q8WXK4 309 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 FEM1CQ96JP0 617 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 PABPC3Q9H361 631 aaKnown RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 FCF1Q9Y324 198 aaKnown RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 TPSB2P20231 275 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 TIE1P35590 1138 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 RHOAP61586 193 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 NIPAL4Q0D2K0 466 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms