RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CDKN2BP42772 138 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 PTGER3P43115 390 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 MARCKSL1P49006 195 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 RENBPP51606 427 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 RWDD2BP57060 319 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 GBE1Q04446 702 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 TAZQ16635 292 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 POM121L1PQ3SYA9 428 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 NT5DC3Q86UY8 548 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 ALYREFQ86V81 257 aaKnown RBP15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 DEFB119Q8N690 84 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 PLD5Q8N7P1 536 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 FAM131CQ96AQ9 280 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 HDAC11Q96DB2 347 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 PDLIM2Q96JY6 352 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 HAUS2Q9NVX0 235 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 DTLQ9NZJ0 730 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 EVLQ9UI08 416 aaPredicted RBP15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 CAPN6Q9Y6Q1 641 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 VPS13AQ96RL7 3174 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 GPR179Q6PRD1 2367 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 BCLAF3A2AJT9 711 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 MIF4GDA9UHW6 222 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ITGB7P26010 798 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 HOXD12P35452 270 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 MPLP40238 635 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 CETN2P41208 172 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 MAPK8P45983 427 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 CSNK1DP48730 415 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 NEK3P51956 506 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 METAP1P53582 386 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ADPRHP54922 357 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 COPS2P61201 443 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 DYNLT1P63172 113 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 CNTN1Q12860 1018 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ZNF805Q5CZA5 627 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 WDR45BQ5MNZ6 344 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 MARC1Q5VT66 337 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 AGBL4Q5VU57 503 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 KAZNQ674X7 775 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ERN2Q76MJ5 926 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 BZW1Q7L1Q6 419 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 SLC41A1Q8IVJ1 513 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 GPR161Q8N6U8 529 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 UBL4BQ8N7F7 174 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 TSEN2Q8NCE0 465 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 OR14C36Q8NHC7 312 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 FATE1Q969F0 183 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ARRDC3Q96B67 414 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 TSGA13Q96PP4 275 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 PSKH2Q96QS6 385 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 HDAC8Q9BY41 377 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 CPEB1Q9BZB8 566 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 ARRDC1-AS1Q9H2J1 176 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 HEY1Q9Y5J3 304 aa15.25■□□□□ 0.03
IGHV3-53-201ENST00000390627 SDK1Q7Z5N4 2213 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 hCG_1818297A0A087WSY0 165 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 FAM47DPA6NHR8 397 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 METTL12A8MUP2 240 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PLK4O00444 970 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PPP1R12AO14974 1030 aaPredicted RBP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PLRG1O43660 514 aaKnown RBP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 CST8O60676 142 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 FTCDO95954 541 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PEX11BO96011 259 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 UGT2B4P06133 528 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 TGM2P21980 687 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCNCP24863 283 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 GKP32189 559 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 MMP13P45452 471 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 NR2C2P49116 596 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 NSUN2Q08J23 767 aaKnown RBP eCLIP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 SLC10A7Q0GE19 358 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 SLC10A2Q12908 348 aaPredicted RBP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 HNRNPDQ14103 355 aaKnown RBP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PDK1Q15118 436 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 DCAF12L1Q5VU92 463 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 KIAA0895LQ68EN5 471 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 NCEH1Q6PIU2 408 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 GDPD4Q6W3E5 623 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 RABEPKQ7Z6M1 372 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 SYT12Q8IV01 421 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 RGL4Q8IZJ4 473 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCNYQ8ND76 341 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 PIGKQ92643 395 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 ALS2CR12Q96Q35 445 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 TUBGCP5Q96RT8 1024 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 C6orf106Q9H6K1 298 aaPredicted RBP15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 LZTFL1Q9NQ48 299 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 OTOGLQ3ZCN5 2332 aa15.24■□□□□ 0.03
IGHV3-53-201ENST00000390627 MATN3O15232 486 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms