RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 LTA4HP09960 611 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 CPB1P15086 417 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 JAK1P23458 1154 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 HPCAP84074 193 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 BROXQ5VW32 411 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC106Q9BWC9 280 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRMT6Q9UJA5 497 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 NFASCO94856 1347 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 ARHGEF9O43307 516 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 LBPP18428 481 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 PRDX6P30041 224 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 TMEM132BQ14DG7 1078 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 CUZD1Q86UP6 607 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCDC185Q8N715 623 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 GATA6Q92908 595 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 ITFG2Q969R8 447 aa13.28□□□□□ -0.28
TRAPPC9-201ENST00000389328 H3BNX3 289 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 GRIN3BO60391 1043 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 B4GALT4O60513 344 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 WDR47O94967 919 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 ANKS6Q68DC2 871 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 TMC5Q6UXY8 1006 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 MIB1Q86YT6 1006 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZNF276Q8N554 614 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 COX4I2Q96KJ9 171 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 DTLQ9NZJ0 730 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 SLC30A1Q9Y6M5 507 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 SQORQ9Y6N5 450 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 DGKBQ9Y6T7 804 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 CCNT2O60583 730 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 SNAP91O60641 907 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 DNAJA2O60884 412 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 SORBS2O94875 1100 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 MFN2O95140 757 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 HSMCR30P0CW71 290 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 PTRHD1Q6GMV3 140 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 CNTD1Q8N815 330 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 RDH11Q8TC12 318 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 ZFYVE19Q96K21 471 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.284e-7■■□□□ 13.8
TRAPPC9-201ENST00000389328 TWNKQ96RR1 684 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 FAM50BQ9Y247 325 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 TRAF6Q9Y4K3 522 aa13.27□□□□□ -0.28
TRAPPC9-201ENST00000389328 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 LRP6O75581 1613 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 FAM159BA6NKW6 160 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ARL2P36404 184 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 GMPRP36959 345 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 FKBP1AP62942 108 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 LSAMPQ13449 338 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 TLR1Q15399 786 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 CLEC6AQ6EIG7 209 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZNF567Q8N184 647 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ATG16L2Q8NAA4 619 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 OR7A2PQ8NGA2 310 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 A0A087X1B8 175 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 EVPLLA8MZ36 301 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 CLDN5O00501 218 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZBTB24O43167 697 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 PLA2G6O60733 806 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 B3GAT3O94766 335 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ASPAP45381 313 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 RSBN1Q5VWQ0 802 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 GALNT18Q6P9A2 607 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 SZRD1Q7Z422 152 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 FSTL5Q8N475 847 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 ANKRD52Q8NB46 1076 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 OR9Q1Q8NGQ5 310 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 GIMAP4Q9NUV9 329 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 PSAT1Q9Y617 370 aa13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-201ENST00000389328 H3BRB1 525 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 DPEP1P16444 411 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 AKT1P31749 480 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MATKP42679 507 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLC26A2P50443 739 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CCT8P50990 548 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TWF1Q12792 350 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 VPS26BQ4G0F5 336 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MBLAC2Q68D91 279 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 SPESP1Q6UW49 350 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 OR2T34Q8NGX1 318 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 OR2T3Q8NH03 318 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MOCOSQ96EN8 888 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 RPRD1AQ96P16 312 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 VAT1Q99536 393 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms