RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SGCGQ13326 291 aa17.67■□□□□ 0.42
HMGN1-203ENST00000380748 PPM1KQ8N3J5 372 aa17.67■□□□□ 0.42
HMGN1-203ENST00000380748 ZNF564Q8TBZ8 553 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-203ENST00000380748 C2orf49Q9BVC5 232 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-203ENST00000380748 SLC4A5Q9BY07 1137 aa17.67■□□□□ 0.42
HMGN1-203ENST00000380748 FOXJ2Q9P0K8 574 aa17.67■□□□□ 0.42
HMGN1-203ENST00000380748 GGT7Q9UJ14 662 aa17.67■□□□□ 0.42
HMGN1-203ENST00000380748 TMX2-CTNND1H3BSU7 103 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 ZNF821O75541 412 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-203ENST00000380748 RHOCP08134 193 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 L1CAMP32004 1257 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 CCKBRP32239 447 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 ETV5P41161 510 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 RECQLP46063 649 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-203ENST00000380748 THOP1P52888 689 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 MORC3Q14149 939 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 TCEA2Q15560 299 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 C4orf17Q53FE4 359 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 ALFQ53S48 1182 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 PARS2Q7L3T8 475 aaKnown RBP17.66■□□□□ 0.42
HMGN1-203ENST00000380748 ARL10Q8N8L6 244 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 SLC35C1Q96A29 364 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 TBATAQ96M53 351 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
HMGN1-203ENST00000380748 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 ITM2BQ9Y287 266 aa17.66■□□□□ 0.42
HMGN1-203ENST00000380748 A0A0D9SEW6 157 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 SLC16A3O15427 465 aaKnown RBP17.65■□□□□ 0.42
HMGN1-203ENST00000380748 AP1G1O43747 822 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 IGFALSP35858 605 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 ABL2P42684 1182 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 CLCN6P51797 869 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 CDH4P55283 916 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 CDK17Q00537 523 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 C5orf22Q49AR2 442 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 FAXCQ5TGI0 409 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 DTX1Q86Y01 620 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 DEFB106AQ8N104 65 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 DENND6BQ8NEG7 585 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 PCDH19Q8TAB3 1148 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 TMEM74Q96NL1 305 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 PSMG3-AS1Q96PY0 264 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 MED15Q96RN5 788 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
HMGN1-203ENST00000380748 THAP9Q9H5L6 903 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 RCOR1Q9UKL0 485 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 UNC13CQ8NB66 2214 aa17.65■□□□□ 0.42
HMGN1-203ENST00000380748 SPENQ96T58 3664 aaKnown RBP17.65■□□□□ 0.42
HMGN1-203ENST00000380748 PAGE1O75459 146 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 F13A1P00488 732 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 CMA1P23946 247 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 NOS2P35228 1153 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 DNM1Q05193 864 aaKnown RBP17.64■□□□□ 0.41
HMGN1-203ENST00000380748 SERINC3Q13530 473 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 RRAGAQ7L523 313 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 TMEM110Q86TL2 294 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 STK32AQ8WU08 396 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 USP7Q93009 1102 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 SIK2Q9H0K1 926 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 ADNPQ9H2P0 1102 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 LRRN3Q9H3W5 708 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 DOLKQ9UPQ8 538 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 PAXBP1Q9Y5B6 917 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 PCDHB11Q9Y5F2 797 aa17.64■□□□□ 0.41
HMGN1-203ENST00000380748 C9orf172C9J069 976 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ADCY5O95622 1261 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-203ENST00000380748 SYKP43405 635 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 FMO5P49326 533 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 PPARDQ03181 441 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 NME3Q13232 169 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 HIST2H2BCQ6DN03 193 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 MACC1Q6ZN28 852 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 VPS36Q86VN1 386 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ZSCAN30Q86W11 494 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ARHGEF19Q8IW93 802 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 OR7D4Q8NG98 312 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 JPH3Q8WXH2 748 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ASB12Q8WXK4 309 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 CENPTQ96BT3 561 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 SLC2A13Q96QE2 648 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 HEPHQ9BQS7 1158 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ARMCX3Q9UH62 379 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-203ENST00000380748 SNX10Q9Y5X0 201 aa17.63■□□□□ 0.41
HMGN1-203ENST00000380748 ICE1Q9Y2F5 2266 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 BLACEA4D250 179 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 NEMP1O14524 444 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 TSPAN6O43657 245 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 GRAP2O75791 330 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 CASRP41180 1078 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 DNA2P51530 1060 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 CCNHP51946 323 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-203ENST00000380748 NDUFA8P51970 172 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 MAPK10P53779 464 aa17.62■□□□□ 0.41
HMGN1-203ENST00000380748 POLE2P56282 527 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms