RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 POLR2EP19388 210 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PTPN3P26045 913 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 TCEAL1Q15170 157 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PDK4Q16654 411 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ARMC3Q5W041 872 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 SETD3Q86TU7 594 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 SLCO2A1Q92959 643 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 BPIFA1Q9NP55 256 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ARMCX1Q9P291 453 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 DNAJB4Q9UDY4 337 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PCDHGB4Q9UN71 923 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CLASP2O75122 1294 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CCNCP24863 283 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC11A1P49279 550 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 NUDT2P50583 147 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 EFL1Q7Z2Z2 1120 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 TNS4Q8IZW8 715 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CASP10Q92851 521 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ERLEC1Q96DZ1 483 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF333Q96JL9 665 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PEBP4Q96S96 227 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 KDM4CQ9H3R0 1056 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 MRGBPQ9NV56 204 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ARHGAP26Q9UNA1 814 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 SDK1Q7Z5N4 2213 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 RNF103-CHMP3A0A140T963 221 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 CREB1P16220 341 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 GATMP50440 423 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 OASLQ15646 514 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 TRIP4Q15650 581 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 RTL3Q8N8U3 475 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 AUTS2Q8WXX7 1259 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PAWRQ96IZ0 340 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 FAR2Q96K12 515 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 NPY6RQ99463 290 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 OXCT2Q9BYC2 517 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 ZDHHC6Q9H6R6 413 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 TCF7L2Q9NQB0 619 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PAPOLBQ9NRJ5 636 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC38A8A6NNN8 435 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SLCO1B7G3V0H7 640 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 GUCA1CO95843 209 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SERPIND1P05546 499 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC22A9Q8IVM8 553 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 RNF168Q8IYW5 571 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 ARL14EPQ8N8R7 260 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 RFWD2Q8NHY2 731 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 THG1LQ9NWX6 298 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 EME2A4GXA9 379 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 TBC1D3BA6NDS4 549 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC9A3R1O14745 358 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 SNRPD1P62314 119 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 POLR2LP62875 67 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PITX1P78337 314 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 UPP1Q16831 310 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PTPRNQ16849 979 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 PARP15Q460N3 678 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 ST13P4Q8IZP2 240 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 FBXO39Q8N4B4 442 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 ACMSDQ8TDX5 336 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
SHROOM1-203ENST00000378679 C9IYK1 514 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 BTN3A1O00481 513 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 ENPP3O14638 875 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 RNASEH1O60930 286 aaKnown RBP14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 PIGNO95427 931 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 COL6A1P12109 1028 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 TFE3P19532 575 aaPredicted RBP14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 HLA-DPA1P20036 260 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 GABRB2P47870 512 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 NME5P56597 212 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 DSC2Q02487 901 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 TRIM60Q495X7 471 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 GPR158Q5T848 1215 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 LINGO4Q6UY18 593 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 TTC7BQ86TV6 843 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 PSMG2Q969U7 264 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 TMEM109Q9BVC6 243 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC39A8Q9C0K1 460 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 GBA3Q9H227 469 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 ASB8Q9H765 288 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 CAB39LQ9H9S4 337 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 UBR3Q6ZT12 1888 aa14.33□□□□□ -0.11
SHROOM1-203ENST00000378679 TCRBV7S3A2A0A539 114 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 MATN3O15232 486 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 E2F6O75461 281 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 BEST1O76090 585 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 FGF1P05230 155 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 HOXB8P17481 243 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 CTPS1P17812 591 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 DRD4P21917 467 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms