RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 KIF19Q2TAC6 998 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ARSIQ5FYB1 569 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 TXNRD3NBQ6F5E7 133 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 H2AFVQ71UI9 128 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 TRIM69Q86WT6 500 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 KDF1Q8NAX2 398 aaPredicted RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 OR2AP1Q8NGE2 309 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ZNF564Q8TBZ8 553 aaPredicted RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 TSC1Q92574 1164 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 LRIG1Q96JA1 1093 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 NHEJ1Q9H9Q4 299 aaPredicted RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 ZNHIT6Q9NWK9 470 aaKnown RBP17.3■□□□□ 0.36
RER1-202ENST00000378512 NEUROG3Q9Y4Z2 214 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 SNX11Q9Y5W9 270 aa17.3■□□□□ 0.36
RER1-202ENST00000378512 ANKRD36A6QL64 1941 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 FAM47DPA6NHR8 397 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 MYO1FO00160 1098 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 BNIP3LO60238 219 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 TMEM253P0C7T8 217 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 RECQLP46063 649 aaPredicted RBP17.29■□□□□ 0.36
RER1-202ENST00000378512 PPP2CBP62714 309 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 RACK1P63244 317 aaKnown RBP17.29■□□□□ 0.36
RER1-202ENST00000378512 PPP2CAP67775 309 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 NEK5Q6P3R8 708 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 RAB44Q7Z6P3 723 aaPredicted RBP17.29■□□□□ 0.36
RER1-202ENST00000378512 SLCO6A1Q86UG4 719 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 TC2NQ8N9U0 490 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 TRIM5Q9C035 493 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 PREBQ9HCU5 417 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 TM7SF3Q9NS93 570 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 BTBD3Q9Y2F9 522 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 MFHAS1Q9Y4C4 1052 aa17.29■□□□□ 0.36
RER1-202ENST00000378512 TRPM6Q9BX84 2022 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 AKR1B15C9JRZ8 316 aaPredicted RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 KPNA3O00505 521 aaPredicted RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 TMCC1O94876 653 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 FTH1P19P0C7X4 201 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 ZNF883P0CG24 379 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 ITGB7P26010 798 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 NUDT1P36639 197 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 ARSEP51690 589 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 TSR1Q2NL82 804 aaKnown RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 SMTNL2Q2TAL5 461 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 PPP6R3Q5H9R7 873 aaPredicted RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 ERN2Q76MJ5 926 aaKnown RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 LZTR1Q8N653 840 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 NPWQ8N729 165 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 SETD7Q8WTS6 366 aaKnown RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 CTNNBL1Q8WYA6 563 aaPredicted RBP17.28■□□□□ 0.36
RER1-202ENST00000378512 MRFAP1L1Q96HT8 127 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 PPP1R16AQ96I34 528 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 TM6SF2Q9BZW4 377 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 ZWILCHQ9H900 591 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 LCMT1Q9UIC8 334 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 MSRB2Q9Y3D2 182 aa17.28■□□□□ 0.36
RER1-202ENST00000378512 TBC1D3DA0A087WVF3 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3IA0A087WXS9 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3EA0A087X179 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3KA0A087X1G2 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3FA6NER0 549 aaPredicted RBP17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3LB9A6J9 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 BUB1O43683 1085 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 AKR1B10O60218 316 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 MTA2O94776 668 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 PROSCO94903 275 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3HP0C7X1 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 IL4RP24394 825 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 SNRPD1P62314 119 aaKnown RBP17.27■□□□□ 0.35
RER1-202ENST00000378512 CCDC15Q0P6D6 951 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TCEAL1Q15170 157 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 CYTH1Q15438 398 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 POM121L1PQ3SYA9 428 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3GQ6DHY5 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3CQ6IPX1 549 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 IL27RAQ6UWB1 636 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 TBC1D3Q8IZP1 549 aaPredicted RBP17.27■□□□□ 0.35
RER1-202ENST00000378512 GRIN3AQ8TCU5 1115 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 CCDC42Q96M95 316 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 CSPG4P5Q96PW8 444 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 DEF6Q9H4E7 631 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 PCDH18Q9HCL0 1135 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.27■□□□□ 0.35
RER1-202ENST00000378512 RCOR3Q9P2K3 495 aaPredicted RBP17.27■□□□□ 0.35
RER1-202ENST00000378512 LHX3Q9UBR4 397 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 PCDHB9Q9Y5E1 797 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 DMXL2Q8TDJ6 3036 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 CABIN1Q9Y6J0 2220 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 FREM2Q5SZK8 3169 aa17.27■□□□□ 0.35
RER1-202ENST00000378512 A0A1W2PR77 199 aa17.26■□□□□ 0.35
RER1-202ENST00000378512 ARHGAP42A6NI28 874 aa17.26■□□□□ 0.35
RER1-202ENST00000378512 H3BRJ5 948 aa17.26■□□□□ 0.35
RER1-202ENST00000378512 J3KR12 359 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms