RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 EFR3BQ9Y2G0 817 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 BTN3A1O00481 513 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ITGA2BP08514 1039 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 CDC16Q13042 620 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 TAF5Q15542 800 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SWT1Q5T5J6 900 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 METTL6Q8TCB7 284 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ZNF516Q92618 1163 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 C19orf60Q96EN9 201 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 TMEM79Q9BSE2 394 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ATAD3AQ9NVI7 634 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ARL8BQ9NVJ2 186 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 USE1Q9NZ43 259 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 CCDC167Q9P0B6 97 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ADRA1BP35368 520 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 GBE1Q04446 702 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 CYP51A1Q16850 503 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 BRMS1LQ5PSV4 323 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SYTL1Q8IYJ3 562 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 STK40Q8N2I9 435 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SPPL2BQ8TCT7 592 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SLC44A1Q8WWI5 657 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 PAIP1Q9H074 479 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ASAH2Q9NR71 780 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 FAM50BQ9Y247 325 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 TRAV19A0A0A6YYK7 116 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 SLC9A3R1O14745 358 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 DHX15O43143 795 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CYP2A6P11509 494 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 SLC2A4P14672 509 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 OR1D2P34982 312 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 MBTD1Q05BQ5 628 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CNTN1Q12860 1018 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 DCTN2Q13561 401 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 C16orf72Q14CZ0 275 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CLNKQ7Z7G1 428 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 FIBCD1Q8N539 461 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 EFCAB3Q8N7B9 438 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 STN1Q9H668 368 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 WDR41Q9HAD4 459 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 A8MX80 341 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 TMEM114B3SHH9 223 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CNOT3O75175 753 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 KATNA1O75449 491 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 TRIP4Q15650 581 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 KCNA10Q16322 511 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 FNIP1Q8TF40 1166 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 MLPHQ9BV36 600 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 PIF1Q9H611 641 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 PTPRHQ9HD43 1115 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 VNN1O95497 513 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ACADMP11310 421 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 GRK4P32298 578 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 AIF1P55008 147 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 PLD5Q8N7P1 536 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 FAM13CQ8NE31 585 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 OR56A4Q8NGH8 313 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 COPS7BQ9H9Q2 264 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ETAA1Q9NY74 926 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ME2P23368 584 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 FASP25445 335 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 RPL14P50914 215 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 MRPS22P82650 360 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 SGCGQ13326 291 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 FASTKQ14296 549 aaKnown RBP15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CYP2R1Q6VVX0 501 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CMC1Q7Z7K0 106 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 CORO1BQ9BR76 489 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 TTPALQ9BTX7 342 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 POMKQ9H5K3 350 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 MORF4L1Q9UBU8 362 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 LGALS13Q9UHV8 139 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 DAPK2Q9UIK4 370 aa15.17■□□□□ 0.02
NPHP4-201ENST00000378156 ASNA1O43681 348 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ADH1AP07327 375 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PPM1AP35813 382 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 IL2P60568 153 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ACOX1Q15067 660 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 EML3Q32P44 896 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 USP45Q70EL2 814 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 OR6Y1Q8NGX8 325 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 VPS33AQ96AX1 596 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MARK4Q96L34 752 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 HIPK3Q9H422 1215 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MYRFQ9Y2G1 1151 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ROBO1Q9Y6N7 1651 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 CFHP08603 1231 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PCNAP12004 261 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 TTKP33981 857 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 KRT20P35900 424 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms