RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LSM12Q3MHD2 195 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CUZD1Q86UP6 607 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 C18orf25Q96B23 403 aaPredicted RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CELF6Q96J87 481 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 OLFM1Q99784 485 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CCDC106Q9BWC9 280 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 APOL5Q9BWW9 433 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 PRDM12Q9H4Q4 367 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NOL11Q9H8H0 719 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 CCNB1IP1Q9NPC3 277 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 EXOSC4Q9NPD3 245 aaKnown RBP8.86□□□□□ -0.99
PCDH9-202ENST00000377865 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 EURLQ9NYK6 297 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 KLHL3Q9UH77 587 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 NENFQ9UMX5 172 aa8.86□□□□□ -0.99
PCDH9-202ENST00000377865 IFRD1O00458 451 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 RGS14O43566 566 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SYNCRIPO60506 623 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 DNAJA2O60884 412 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 USP12O75317 370 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 C2P06681 752 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CD48P09326 243 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CSH1P0DML2 217 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CSH2P0DML3 217 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SPRED3Q2MJR0 410 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC25A52Q3SY17 297 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 KRT73Q86Y46 540 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 FAM126BQ8IXS8 530 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 STX19Q8N4C7 294 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF781Q8N8C0 355 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 STAG3L4Q8TBR4 150 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 BBS2Q9BXC9 721 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 LATS2Q9NRM7 1088 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 KLK14Q9P0G3 267 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 WRAP73Q9P2S5 460 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TEX264Q9Y6I9 313 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 IFNA14P01570 189 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 INSRRP14616 1297 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CCNFP41002 786 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 GMPSP49915 693 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC7A2P52569 658 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 DEPDC1Q5TB30 811 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 KIAA1841Q6NSI8 718 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 FBXO16Q8IX29 292 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 LRRC52Q8N7C0 313 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 LGMNQ99538 433 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 GBA3Q9H227 469 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TLE6Q9H808 572 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ALS2Q96Q42 1657 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 C2CD4BA6NLJ0 364 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 RAD51BO15315 384 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CAPN15O75808 1086 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 AP2A1O95782 977 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 MT-CO1P00395 513 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 LTFP02788 710 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ACADVLP49748 655 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TUBA4AP68366 448 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 MPP2Q14168 576 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC7A6OSQ96CW6 309 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 MCRS1Q96EZ8 462 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 EBF4Q9BQW3 602 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 YTHDF1Q9BYJ9 559 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 GPR63Q9BZJ6 419 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ALG9Q9H6U8 611 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 WDR55Q9H6Y2 383 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TMEM216Q9P0N5 145 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TNPO3Q9Y5L0 923 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ANKRD36CQ5JPF3 1778 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 EME2A4GXA9 379 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC15A5A6NIM6 579 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ZNF682O95780 498 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ANXA6P08133 673 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC2A4P14672 509 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 NPR3P17342 541 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 PRKCHP24723 683 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CPT1AP50416 773 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 HPCAP84074 193 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 NADK2Q4G0N4 442 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 NKAPQ8N5F7 415 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ATG16L2Q8NAA4 619 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 LPGAT1Q92604 370 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 PAWRQ96IZ0 340 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 FADS3Q9Y5Q0 445 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SNTNA6NMZ2 147 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 PDLIM1O00151 329 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TIPRLO75663 272 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ATG7O95352 703 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 RECQLP46063 649 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 KPNA1P52294 538 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SLC25A11Q02978 314 aaKnown RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 VWA5B1Q5TIE3 1220 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 CENPNQ96H22 339 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 MTG1Q9BT17 334 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-202ENST00000377865 ELOVL4Q9GZR5 314 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 SPATC1LQ9H0A9 340 aa8.85□□□□□ -0.99
PCDH9-202ENST00000377865 TKTL2Q9H0I9 626 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms