RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CACNG3O60359 315 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 DCTN3O75935 186 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 CCND1P24385 295 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 ACADSBP45954 432 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 YWHAZP63104 245 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 OGDHQ02218 1023 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 SLC25A11Q02978 314 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 CRYMQ14894 314 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 LPAL2Q16609 132 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 KAZNQ674X7 775 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 IL17RCQ8NAC3 791 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 ZBTB44Q8NCP5 570 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 SORCS1Q8WY21 1168 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 PLD4Q96BZ4 506 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 SLC2A13Q96QE2 648 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 RAB3IPQ96QF0 476 aaPredicted RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 COX16Q9P0S2 106 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 BAIAP2L1Q9UHR4 511 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 FBXO10Q9UK96 956 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 HBS1LQ9Y450 684 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 UNC5CO95185 931 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 MOCS2O96007 188 aaPredicted RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 PSMA2P25787 234 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 FOXN2P32314 431 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 CCR3P51677 355 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TBX4P57082 545 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 ATP13A4Q4VNC1 1196 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TBC1D1Q86TI0 1168 aaPredicted RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 FITM2Q8N6M3 262 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TERB1Q8NA31 727 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 TXNDC5Q8NBS9 432 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 CDK5RAP1Q96SZ6 601 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 FAM118BQ9BPY3 351 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
VRK3-202ENST00000377011 DONSONQ9NYP3 566 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 STOML2Q9UJZ1 356 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 SNX10Q9Y5X0 201 aa12.62□□□□□ -0.39
VRK3-202ENST00000377011 ABCA7Q8IZY2 2146 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 PROB1E7EW31 1015 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 TM9SF1O15321 606 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 IRAK2O43187 625 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 TYROBPO43914 113 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 EDF1O60869 148 aaKnown RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 LILRB5O75023 590 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 SPAG6O75602 509 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 KRT3P12035 628 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 TCF4P15884 667 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 KRT15P19012 456 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 SLC6A3Q01959 620 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 DMC1Q14565 340 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 ZKSCAN8Q15776 578 aaPredicted RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 ARTNQ5T4W7 220 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 ZBED8Q8IZ13 594 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 CFAP52Q8N1V2 620 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 SYNPOQ8N3V7 929 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 DCLK2Q8N568 766 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 EMC1Q8N766 993 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 FRMD1Q8N878 549 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 NAT8LQ8N9F0 302 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 GLIS1Q8NBF1 620 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 INPP5DQ92835 1189 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 FRMD8Q9BZ67 464 aaPredicted RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 ACSS3Q9H6R3 686 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 KLHL11Q9NVR0 708 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 NOP53Q9NZM5 478 aaKnown RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 DEC1Q9P2X7 70 aa12.61□□□□□ -0.39
VRK3-202ENST00000377011 RPL26L1Q9UNX3 145 aaKnown RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
VRK3-202ENST00000377011 GOLGA8SH3BPF8 625 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 APOC4-APOC2K7ER74 178 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 DCLK1O15075 740 aa12.6□□□□□ -0.39
VRK3-202ENST00000377011 ACSL4O60488 711 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms