RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CRISPLD1Q9H336 500 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 DENND2DQ9H6A0 471 aaPredicted RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 MCM8Q9UJA3 840 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 MID2Q9UJV3 735 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 RPL26L1Q9UNX3 145 aaKnown RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 IGLV3-10A0A075B6K4 115 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 HSPA4LO95757 839 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 APOA4P06727 396 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 ARNTP27540 789 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 GABRB3P28472 473 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 CD86P42081 329 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 KDSRQ06136 332 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 SLC12A1Q13621 1099 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 RTP2Q5QGT7 225 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 RSPO2Q6UXX9 243 aaPredicted RBP20.47■□□□□ 0.87
VSX1-202ENST00000376709 ATG14Q6ZNE5 492 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 PSMG2Q969U7 264 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 IMP4Q96G21 291 aaKnown RBP20.47■□□□□ 0.87
VSX1-202ENST00000376709 CCDC106Q9BWC9 280 aa20.47■□□□□ 0.87
VSX1-202ENST00000376709 B2RBV5 119 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 PITPNM1O00562 1244 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 TRIM13O60858 407 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 PEX11AO75192 247 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 SLC1A2P43004 574 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 PGGT1BP53609 377 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 DUSP4Q13115 394 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 UBAP2LQ14157 1087 aaKnown RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 ZNF470Q6ECI4 717 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 KDELC1Q6UW63 502 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 SLC41A1Q8IVJ1 513 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 OR6Y1Q8NGX8 325 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 NUDCD1Q96RS6 583 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 ACE2Q9BYF1 805 aaPredicted RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 TREX1Q9NSU2 369 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 TAGLN3Q9UI15 199 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 PCDHB12Q9Y5F1 795 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 GREB1Q4ZG55 1949 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 PRR5-ARHGAP8B1AHC4 643 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 ENTPD5O75356 428 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 SLC35E2BP0CK96 405 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 ATN1P54259 1190 aaPredicted RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 CCL23P55773 120 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 ARHGAP8P85298 464 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 ELAVL2Q12926 359 aaKnown RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 RFWD3Q6PCD5 774 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 NAPRTQ6XQN6 538 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 CIR1Q86X95 450 aaPredicted RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 FATE1Q969F0 183 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 SCYL1Q96KG9 808 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 SPATA17Q96L03 361 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 RNPEPL1Q9HAU8 725 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 NKX1-2Q9UD57 310 aaPredicted RBP20.46■□□□□ 0.87
VSX1-202ENST00000376709 SORCS3Q9UPU3 1222 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 C15orf41Q9Y2V0 281 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 CDY1Q9Y6F8 540 aa20.46■□□□□ 0.87
VSX1-202ENST00000376709 FAM95CA0A1B0GW59 222 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 HEATR9A2RTY3 570 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 TK2O00142 265 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 RAMP2O60895 175 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 H2AFYO75367 372 aaKnown RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 STMN1P16949 149 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 GLRBP48167 497 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 CSRP3P50461 194 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 POLD3Q15054 466 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 CFAP157Q5JU67 520 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 KIAA0930Q6ICG6 404 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 MAVSQ7Z434 540 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 TMPRSS6Q8IU80 811 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 ARHGAP24Q8N264 748 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 GIPC2Q8TF65 315 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 FAM167BQ9BTA0 163 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 CCSER2Q9H7U1 834 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 VPS45Q9NRW7 570 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 DNAJC28Q9NX36 388 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 SCN5AQ14524 2016 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 TBKBP1A7MCY6 615 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 TMEM114B3SHH9 223 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 SPECC1L-ADORA2AF8WAN1 911 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 H7C4K7 107 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 OR1E1P30953 314 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 IDH3AP50213 366 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 SERPINH1P50454 418 aaKnown RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 DSC2Q02487 901 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 SMARCB1Q12824 385 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 TUBB3Q13509 450 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 LCA5Q86VQ0 697 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 TMEM173Q86WV6 379 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 NPAS4Q8IUM7 802 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 RDH11Q8TC12 318 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 KCTD4Q8WVF5 259 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 C1QTNF1Q9BXJ1 281 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 OXCT2Q9BYC2 517 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 SEZ6LQ9BYH1 1024 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 PAK6Q9NQU5 681 aaPredicted RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 OXSMQ9NWU1 459 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 RUVBL2Q9Y230 463 aaKnown RBP20.45■□□□□ 0.86
VSX1-202ENST00000376709 ACOT9Q9Y305 439 aa20.45■□□□□ 0.86
VSX1-202ENST00000376709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 TLR5O60602 858 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms