RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 GRM3Q14832 879 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 LY6KQ17RY6 165 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 RPS27LQ71UM5 84 aaKnown RBP11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 FASTKD5Q7L8L6 764 aaKnown RBP11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 SLC7A14Q8TBB6 771 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 SH3KBP1Q96B97 665 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 ASB9Q96DX5 294 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 SCYL1Q96KG9 808 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 BIRC8Q96P09 236 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 CAMKK2Q96RR4 588 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 C1QTNF1Q9BXJ1 281 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 PLGRKTQ9HBL7 147 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 PFDN4Q9NQP4 134 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 CHRAC1Q9NRG0 131 aa11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 CNOT11Q9UKZ1 510 aaKnown RBP11.65□□□□□ -0.54
TM9SF2-201ENST00000376387 ACKR2O00590 384 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 FBP2O00757 339 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 TADA2AO75478 443 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SEC24DO94855 1032 aaPredicted RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 LCP1P13796 627 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CD97P48960 835 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CLCN3P51790 818 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 TRIM25Q14258 630 aaKnown RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 STXBP2Q15833 593 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC44A4Q53GD3 710 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 LIPMQ5VYY2 423 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 GPR180Q86V85 440 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CCNYL1Q8N7R7 359 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 MAML3Q96JK9 1138 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 OSBPL11Q9BXB4 747 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CNOT6Q9ULM6 557 aaKnown RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 EVPLQ92817 2033 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 ZNF839A8K0R7 811 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 STAMBPO95630 424 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PFKPQ01813 784 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 NAB1Q13506 487 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 AMHR2Q16671 573 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 DGKDQ16760 1214 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 NHSL2Q5HYW2 709 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SPANXN3Q5MJ09 141 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 IER5Q5VY09 327 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 XKR5Q6UX68 686 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 ZYG11AQ6WRX3 759 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CHSY3Q70JA7 882 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 TNIP2Q8NFZ5 429 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SGF29Q96ES7 293 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 C11orf84Q9BUA3 381 aaPredicted RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 NAA50Q9GZZ1 169 aaKnown RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PRDM12Q9H4Q4 367 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 TNFRSF12AQ9NP84 129 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PNPLA3Q9NST1 481 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 BCAP29Q9UHQ4 241 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 TLL2Q9Y6L7 1015 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SCN1AP35498 2009 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SAC3D1A6NKF1 404 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PPEF2O14830 753 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 MPOP05164 745 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 C8BP07358 591 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PPP1R3AQ16821 1122 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC10A6Q3KNW5 377 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 CCBE1Q6UXH8 406 aaPredicted RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 PID1Q7Z2X4 250 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 C7orf31Q8N865 590 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC35F5Q8WV83 523 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 VPS39Q96JC1 886 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SPACA7Q96KW9 195 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 NT5C1AQ9BXI3 368 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 FZD8Q9H461 694 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 DPEP3Q9H4B8 488 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 ARMC7Q9H6L4 198 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC38A7Q9NVC3 462 aa11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 EVLQ9UI08 416 aaPredicted RBP11.64□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM149AA5PLN7 773 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 DLGAP1O14490 977 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 DLX3O60479 287 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 HNRNPLP14866 589 aaKnown RBP eCLIP11.63□□□□□ -0.555e-9■□□□□ 9.2
TM9SF2-201ENST00000376387 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 RHDQ02161 417 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 DPYSQ14117 519 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 TSTD2Q5T7W7 516 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ZNF786Q8N393 782 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PPWD1Q96BP3 646 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PAIP1Q9H074 479 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ACAD9Q9H845 621 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 SDHDO14521 159 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 MAPK10P53779 464 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PRKCQQ04759 706 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 INCA1Q0VD86 236 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 IFRD2Q12894 506 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms