RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 TTC39BQ5VTQ0 682 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 BROXQ5VW32 411 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 DCUN1D2Q6PH85 259 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 APCDD1Q8J025 514 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 CENPIQ92674 756 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 MYEOVQ96EZ4 313 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 LGMNQ99538 433 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 EIF3CQ99613 913 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 FAM204AQ9H8W3 233 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 DDIT4Q9NX09 232 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 COX16Q9P0S2 106 aa12.44□□□□□ -0.42
LSM2-208ENST00000375661 REXO2Q9Y3B8 237 aaKnown RBP12.44□□□□□ -0.42
LSM2-208ENST00000375661 C1QTNF3-AMACRE9PGA6 284 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
LSM2-208ENST00000375661 DXOO77932 396 aaKnown RBP12.43□□□□□ -0.42
LSM2-208ENST00000375661 NDUFA10O95299 355 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 SDC4P31431 198 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
LSM2-208ENST00000375661 TMPRSS3P57727 454 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 CXADRP78310 365 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 DAB2P98082 770 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 CCDC173Q0VFZ6 552 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 LGI2Q8N0V4 545 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 OR4C6Q8NH72 309 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 FRS2Q8WU20 508 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 OR8D1Q8WZ84 308 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 KLHDC7BQ96G42 594 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 PREBQ9HCU5 417 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
LSM2-208ENST00000375661 ANLNQ9NQW6 1124 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 PIGVQ9NUD9 493 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 EVA1BQ9NVM1 165 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
LSM2-208ENST00000375661 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 F5H5T6 163 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 J3QKU1 62 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CCP110O43303 1012 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 MOCS2O96007 188 aaPredicted RBP12.42□□□□□ -0.42
LSM2-208ENST00000375661 F9P00740 461 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 GP1BAP07359 652 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 TACR2P21452 398 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CXCR3P49682 368 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 HDAC4P56524 1084 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 ERVPABLB-1P60509 514 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 ATP11AP98196 1134 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 DEUP1Q05D60 604 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 NME3Q13232 169 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CDO1Q16878 200 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 TAF1BQ53T94 588 aaPredicted RBP12.42□□□□□ -0.42
LSM2-208ENST00000375661 CDCP2Q5VXM1 449 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 NEK5Q6P3R8 708 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 PCSK4Q6UW60 755 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CHSY1Q86X52 802 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 ATP6V0D2Q8N8Y2 350 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 ACRBPQ8NEB7 543 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 FNIP1Q8TF40 1166 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
LSM2-208ENST00000375661 IFT43Q96FT9 208 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 CNPY3Q9BT09 278 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 NUP85Q9BW27 656 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 USP29Q9HBJ7 922 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 KLHL11Q9NVR0 708 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.42□□□□□ -0.42
LSM2-208ENST00000375661 ARHGEF38Q9NXL2 777 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 SLC12A6Q9UHW9 1150 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 XPO7Q9UIA9 1087 aaKnown RBP12.42□□□□□ -0.42
LSM2-208ENST00000375661 INTUQ9ULD6 942 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 TFR2Q9UP52 801 aa12.42□□□□□ -0.42
LSM2-208ENST00000375661 A0A1B0GVM2 712 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 TCAF2A6NFQ2 919 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 TRIM38O00635 465 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 MCF2LO15068 1137 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 ATP9BO43861 1147 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 SDC3O75056 442 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 ALPPL2P10696 532 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 SLC2A3P11169 496 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 CKMT1AP12532 417 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 DGKAP23743 735 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms