RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 GAL3ST4Q96RP7 486 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PKP4Q99569 1192 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 RNF26Q9BY78 433 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MRPL4Q9BYD3 311 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PCM1Q15154 2024 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 A0A0A0MRY4 1105 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CRYM-AS1A6NIL9 109 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ISM1B1AKI9 464 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 H7C4K7 107 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CBX4O00257 560 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 C21orf2O43822 256 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PDE8AO60658 829 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SNAPC5O75971 98 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 KLHL2O95198 593 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CELF2O95319 508 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 LDOC1O95751 146 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TTLL1O95922 423 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CYP11A1P05108 521 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PHKG2P15735 406 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 RPL10AP62906 217 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PPARAQ07869 468 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TFDP2Q14188 446 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 HABP2Q14520 560 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 C6orf132Q5T0Z8 1188 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MZT2AQ6P582 158 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZBTB49Q6ZSB9 765 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SVOPQ8N4V2 548 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF565Q8N9K5 539 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 KLHL6Q8WZ60 621 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PBKQ96KB5 322 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SPATA13Q96N96 652 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TEFMQ96QE5 360 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 DHRS9Q9BPW9 319 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 WDR11Q9BZH6 1224 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 NELFAQ9H3P2 528 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MUC13Q9H3R2 512 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 DCTPP1Q9H773 170 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF639Q9UID6 485 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MRTO4Q9UKD2 239 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 OAS3Q9Y6K5 1087 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF780BQ9Y6R6 833 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 LOC100509620A0A075B734 347 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PGRMC1O00264 195 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MTX2O75431 263 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CDC123O75794 336 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 GSTT2P0CG29 244 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 GSTT2BP0CG30 244 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF3P17036 446 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CYP2A7P20853 494 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MAPK8P45983 427 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 FCGRTP55899 365 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PCDH1Q08174 1060 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PPA1Q15181 289 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 RFX4Q33E94 735 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SMUG1Q53HV7 270 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MAMSTRQ6ZN01 415 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SMIM5Q71RC9 77 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CNPY4Q8N129 248 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 HPS1Q92902 700 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF184Q99676 751 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 COMMD4Q9H0A8 199 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 FARSBQ9NSD9 589 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 NKX1-2Q9UD57 310 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 MLXQ9UH92 298 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 KNL1Q8NG31 2342 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TROQ12816 1431 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 AP2A2O94973 939 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 LDLRP01130 860 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 IL1BP01584 269 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 BMP3P12645 472 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TFE3P19532 575 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SLC7A1P30825 629 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 HPCAL1P37235 193 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 POLD2P49005 469 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CX3CR1P49238 355 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PTPN5P54829 565 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 LRRC14Q15048 493 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 XKR4Q5GH76 650 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 GPR158Q5T848 1215 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SLC30A6Q6NXT4 461 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 KLHL35Q6PF15 583 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 C16orf86Q6ZW13 317 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CCDC80Q76M96 950 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 ZNF572Q7Z3I7 529 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PTAR1Q7Z6K3 402 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 SYT12Q8IV01 421 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 AUTS2Q8WXX7 1259 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 CCDC74AQ96AQ1 378 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TGS1Q96RS0 853 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TMED9Q9BVK6 235 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 WWP1Q9H0M0 922 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 FN3KQ9H479 309 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TRPV4Q9HBA0 871 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 PNO1Q9NRX1 252 aaKnown RBP4.68□□□□□ -1.66
SCN1A-202ENST00000375405 TBC1D13Q9NVG8 400 aa4.68□□□□□ -1.66
SCN1A-202ENST00000375405 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms