RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ADGRG6Q86SQ4 1221 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 MON1AQ86VX9 555 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 TP53INP2Q8IXH6 220 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 IPMKQ8NFU5 416 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 SCG3Q8WXD2 468 aaKnown RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 SCLYQ96I15 445 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 FAR2Q96K12 515 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 EBF4Q9BQW3 602 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 FICDQ9BVA6 458 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 C20orf27Q9GZN8 174 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 DRC3Q9H069 523 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 ZNF395Q9H8N7 513 aaPredicted RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 PNPOQ9NVS9 261 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 RBM22Q9NW64 420 aaKnown RBP eCLIP12.39□□□□□ -0.43
UBR4-203ENST00000375225 TLR6Q9Y2C9 796 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 TRPC5OSA6NMA1 111 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 E9PAM4 449 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 G3V2L1 256 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 ENPP3O14638 875 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 HDAC3O15379 428 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 MAFKO60675 156 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 KRT36O76013 467 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TOP3BO95985 862 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 HOXB8P17481 243 aaPredicted RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 PSEN1P49768 467 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TUBP50607 506 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 RPL14P50914 215 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 SESN3P58005 492 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 BLMHQ13867 455 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 GRM3Q14832 879 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 GPNMBQ14956 572 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 HSF5Q4G112 596 aaPredicted RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TRIM68Q6AZZ1 485 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 RIPOR1Q6ZS17 1223 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 MYLK4Q86YV6 388 aaPredicted RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 ACTRT2Q8TDY3 377 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 DPF3Q92784 378 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 RANBP9Q96S59 729 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 RTKNQ9BST9 563 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 MCMBPQ9BTE3 642 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 CCDC28BQ9BUN5 200 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 MRPL9Q9BYD2 267 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 SLC25A51Q9H1U9 297 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 COG4Q9H9E3 785 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TRPC7Q9HCX4 862 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TCF7L2Q9NQB0 619 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 COMMD8Q9NX08 183 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 RUVBL2Q9Y230 463 aaKnown RBP12.38□□□□□ -0.43
UBR4-203ENST00000375225 PTPRDP23468 1912 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
UBR4-203ENST00000375225 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 NPHS1O60500 1241 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 PAPSS2O95340 614 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 PRKCGP05129 697 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 RHOQP17081 205 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 TPH1P17752 444 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CLCN5P51795 746 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 RABGGTBP53611 331 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 HNRNPDQ14103 355 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 GSTA3Q16772 222 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 LRRC8EQ6NSJ5 796 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CNKSR3Q6P9H4 555 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 OTOP3Q7RTS5 596 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 GALNT7Q86SF2 657 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ARHGAP12Q8IWW6 846 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 NUP93Q8N1F7 819 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 MIEF2Q96C03 454 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 C8orf48Q96LL4 319 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ZNF778Q96MU6 729 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 MRPL57Q9BQC6 102 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 EML4Q9HC35 981 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 TMEM30AQ9NV96 361 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 NMRK1Q9NWW6 199 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 UBP1Q9NZI7 540 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 IL1RAPL1Q9NZN1 696 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 NCKIPSDQ9NZQ3 722 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 PRPF19Q9UMS4 504 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 MAGED2Q9UNF1 606 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 CDYLQ9Y232 598 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms