RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HTRA4P83105 476 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ACTN3Q08043 901 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FSTL4Q6MZW2 842 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SETD3Q86TU7 594 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 C10orf82Q8WW14 230 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 AUTS2Q8WXX7 1259 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TSSK1BQ9BXA7 367 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SNX15Q9NRS6 342 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 AGO1Q9UL18 857 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ASB3Q9Y575 518 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 USH1CQ9Y6N9 552 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 A0A1B0GVM2 712 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LOC285095A0A1B0GVY8 99 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HEATR9A2RTY3 570 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TCAF2A6NFQ2 919 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PAPSS2O95340 614 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MPOP05164 745 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 BPGMP07738 259 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LINC00271P0C7V0 271 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CTSAP10619 480 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TYK2P29597 1187 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SERPINH1P50454 418 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CSRP3P50461 194 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ITKQ08881 620 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MSLNQ13421 630 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 IHHQ14623 411 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 UGP2Q16851 508 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SPRED3Q2MJR0 410 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZFRQ96KR1 1074 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RMDN2Q96LZ7 410 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RHOJQ9H4E5 214 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ALG13Q9NP73 1137 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GKN1Q9NS71 199 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 EMCNQ9ULC0 261 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SLC12A4Q9UP95 1085 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 KDELR3O43731 214 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PLIN3O60664 434 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FGF18O76093 207 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TROVE2P10155 538 aaKnown RBP eCLIP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ARNTP27540 789 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CHRNA4P43681 627 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RPS24P62847 133 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF235Q14590 738 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RFTN1Q14699 578 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PCSK7Q16549 785 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PABPC1LQ4VXU2 614 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ATG16L1Q676U5 607 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ESRP1Q6NXG1 681 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 BBS5Q8N3I7 341 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 VPS39Q96JC1 886 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GPR22Q99680 433 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF334Q9HCZ1 680 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TBC1D30Q9Y2I9 924 aa18.22■□□□□ 0.51
HLA-DQB1-201ENST00000374943 A0A0D9SEW6 157 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GSRP00390 522 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 EPOP01588 193 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 NEFHP12036 1026 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SCTRP47872 440 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 POLD2P49005 469 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LIG3P49916 1009 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 N4BP2L1Q5TBK1 243 aaPredicted RBP18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 OTOP2Q7RTS6 562 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZC3HC1Q86WB0 502 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 NUDCD3Q8IVD9 361 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 OR52K2Q8NGK3 314 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 E2F7Q96AV8 911 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FEM1CQ96JP0 617 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 C7orf26Q96N11 449 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MGME1Q9BQP7 344 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FAM167BQ9BTA0 163 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ACE2Q9BYF1 805 aaPredicted RBP18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ATXN3LQ9H3M9 355 aa18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MTO1Q9Y2Z2 717 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TOP3BO95985 862 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ATXN1LP0C7T5 689 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MBL2P11226 248 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ETFBP38117 255 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 OXCT1P55809 520 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ZNF177Q13360 481 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ZNF783Q6ZMS7 281 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 NLRP9Q7RTR0 991 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CLEC14AQ86T13 490 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FIBCD1Q8N539 461 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 WBP2Q969T9 261 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SEMA3CQ99985 751 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MECRQ9BV79 373 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SEPT3Q9UH03 358 aa18.2■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MUSKO15146 869 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 VAPBO95292 243 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PROCP04070 461 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 RHOCP08134 193 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CNPP09543 421 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms