RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 EXOC2Q96KP1 924 aa21.3■■□□□ 1
MAP1LC3A-202ENST00000374837 ZNF599Q96NL3 588 aa21.3■■□□□ 1
MAP1LC3A-202ENST00000374837 MAK16Q9BXY0 300 aaKnown RBP21.3■■□□□ 1
MAP1LC3A-202ENST00000374837 ATXN2Q99700 1313 aaKnown RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 OTOGLQ3ZCN5 2332 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 GRID2IPA4D2P6 1211 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 MEI4A8MW99 385 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 INSIG1O15503 277 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 SLC7A4O43246 635 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 MAP3K6O95382 1288 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 ADPRHP54922 357 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 CCZ1BP86790 482 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 CCZ1P86791 482 aaPredicted RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 GBE1Q04446 702 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 RAD51Q06609 339 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 SLC10A7Q0GE19 358 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 GALNT2Q10471 571 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 SLC10A2Q12908 348 aaPredicted RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 LBRQ14739 615 aaKnown RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 WDR45BQ5MNZ6 344 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 SLC9A4Q6AI14 798 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 NCEH1Q6PIU2 408 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 KATNAL2Q8IYT4 538 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 RGL4Q8IZJ4 473 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 GPR161Q8N6U8 529 aaKnown RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 TSEN2Q8NCE0 465 aaKnown RBP21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 OR2T34Q8NGX1 318 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 DNASE2BQ8WZ79 361 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 KRT35Q92764 455 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 DYRK4Q9NR20 520 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 VPS45Q9NRW7 570 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 CACNA1BQ00975 2339 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 SDK1Q7Z5N4 2213 aa21.29■■□□□ 1
MAP1LC3A-202ENST00000374837 PLXND1Q9Y4D7 1925 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 LRRC72A6NJI9 287 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 FSBPO95073 299 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 ZRANB2O95218 330 aaKnown RBP eCLIP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 GARSP41250 739 aaKnown RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 DPP6P42658 865 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 CDKN2BP42772 138 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 RGRP47804 291 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 SF3A2Q15428 464 aaKnown RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 TAZQ16635 292 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 IFI16Q16666 785 aaKnown RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 PIP5KL1Q5T9C9 394 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 TMCO4Q5TGY1 634 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 PEAR1Q5VY43 1037 aaPredicted RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 KIAA0895LQ68EN5 471 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 ERN2Q76MJ5 926 aaKnown RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 RFX6Q8HWS3 928 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 RCOR2Q8IZ40 523 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 PLD5Q8N7P1 536 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 PPP1R16AQ96I34 528 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 CINPQ9BW66 212 aaPredicted RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 HDAC8Q9BY41 377 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 DTLQ9NZJ0 730 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 SEPT3Q9UH03 358 aa21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.28■■□□□ 1
MAP1LC3A-202ENST00000374837 PATE3B3GLJ2 98 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 C10orf142B7Z368 130 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 APOL1O14791 398 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 MUSKO15146 869 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 PLRG1O43660 514 aaKnown RBP21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 UGT2B4P06133 528 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 ITGB7P26010 798 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 CSNK1DP48730 415 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 TAS2R38P59533 333 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 CCDC15Q0P6D6 951 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 PUM1Q14671 1186 aaKnown RBP eCLIP21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 GDPD4Q6W3E5 623 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 SPOCD1Q6ZMY3 1216 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 SRLQ86TD4 932 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 LRRN4Q8WUT4 740 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 BIRC7Q96CA5 298 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 PSKH2Q96QS6 385 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 OSBPL1AQ9BXW6 950 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 CPEB1Q9BZB8 566 aaKnown RBP21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 KDM4CQ9H3R0 1056 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 EIF2B4Q9UI10 523 aaKnown RBP21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 PCDHA3Q9Y5H8 950 aa21.27■■□□□ 1
MAP1LC3A-202ENST00000374837 TBC1D3DA0A087WVF3 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3IA0A087WXS9 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3EA0A087X179 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3KA0A087X1G2 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3FA6NER0 549 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 C16orf96A6NNT2 1141 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3LB9A6J9 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 IGHV4-34P06331 123 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3HP0C7X1 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KRT10P13645 584 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZFXP17010 805 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CTNNA2P26232 953 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CTNNA1P35221 906 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HOXD12P35452 270 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NSUN2Q08J23 767 aaKnown RBP eCLIP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 LLGL1Q15334 1064 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZNF805Q5CZA5 627 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3GQ6DHY5 549 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms