RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TBL1XO60907 577 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 GJA1P17302 382 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 BMPR1AP36894 532 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 ZXDBP98169 803 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 IHHQ14623 411 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 TEDDM1Q5T9Z0 273 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 RNF219Q5W0B1 726 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 PDPK2PQ6A1A2 396 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 SPATS2Q86XZ4 545 aaKnown RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 CCDC117Q8IWD4 279 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 HJURPQ8NCD3 748 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 LRRC3Q9BY71 257 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 STOML2Q9UJZ1 356 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 DOCK6Q96HP0 2047 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 A0A1W2PRU2 124 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 KDELR3O43731 214 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 DNAJB1P25685 340 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 ABCG1P45844 678 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 PDE1BQ01064 536 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 GRTP1Q5TC63 336 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 CXorf57Q6NSI4 855 aaKnown RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 PIGWQ7Z7B1 504 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 BBS5Q8N3I7 341 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 CARNMT1Q8N4J0 409 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 CABS1Q96KC9 395 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 CINPQ9BW66 212 aaPredicted RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 MRM3Q9HC36 420 aaKnown RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 ASAH2Q9NR71 780 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
PTPN20-203ENST00000374342 LAMA2P24043 3122 aaKnown RBP17.1■□□□□ 0.33
PTPN20-203ENST00000374342 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 C2orf71A6NGG8 1288 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 CBX4O00257 560 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 NRG2O14511 850 aaPredicted RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 GREM1O60565 184 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 TOP3BO95985 862 aaKnown RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 C1RP00736 705 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 CDC25CP30307 473 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 ETV4P43268 484 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 PPM1LQ5SGD2 360 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 Q6ZNB5 142 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 RGS9BPQ6ZS82 235 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SPRED2Q7Z698 418 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 TADA1Q96BN2 335 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 TLR9Q9NR96 1032 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 HAUS2Q9NVX0 235 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SLC2A6Q9UGQ3 507 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SEPT3Q9UH03 358 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 TBC1D30Q9Y2I9 924 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 IRAK3Q9Y616 596 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 H0Y626 953 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 DHRS4L1P0CG22 281 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 LIMK2P53671 638 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 IFT88Q13099 833 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 SIRPB2Q5JXA9 342 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
PTPN20-203ENST00000374342 ANKS4BQ8N8V4 417 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 BHMTQ93088 406 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 IFT43Q96FT9 208 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 ARNT2Q9HBZ2 717 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 HCFC1R1Q9NWW0 138 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 PRKAG3Q9UGI9 489 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 PLLPQ9Y342 182 aa17.09■□□□□ 0.33
PTPN20-203ENST00000374342 LINC01553A4QN01 128 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 SNX3O60493 162 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 VAPBO95292 243 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.33
PTPN20-203ENST00000374342 CGB2Q6NT52 195 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 SPATA21Q7Z572 469 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 DCLK2Q8N568 766 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 MRPL43Q8N983 215 aaKnown RBP17.08■□□□□ 0.33
PTPN20-203ENST00000374342 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 ACMSDQ8TDX5 336 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF75CPQ92670 426 aaPredicted RBP17.08■□□□□ 0.33
PTPN20-203ENST00000374342 ACE2Q9BYF1 805 aaPredicted RBP17.08■□□□□ 0.33
PTPN20-203ENST00000374342 PITPNM3Q9BZ71 974 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 SLCO1B3Q9NPD5 702 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 GGA2Q9UJY4 613 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.33
PTPN20-203ENST00000374342 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms