RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 BCAS1O75363 584 aaPredicted RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 NCAM1P13591 858 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 EEF1B2P24534 225 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 GRIA1P42261 906 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 WNT7BP56706 349 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 AQP6Q13520 282 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 TFDP2Q14188 446 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 STILQ15468 1287 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 C4orf22Q6V702 233 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 ZFP90Q8TF47 636 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 CCM2LQ9NUG4 571 aaPredicted RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 CRNNQ9UBG3 495 aaPredicted RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 MTRRQ9UBK8 725 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 PTPRJQ12913 1337 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 SLC22A1O15245 554 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 RASAL1O95294 804 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 TRUB2O95900 331 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 LTFP02788 710 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 IL1R1P14778 569 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 YWHABP31946 246 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 DMP1Q13316 513 aaPredicted RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 LRP8Q14114 963 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 SLX4IPQ5VYV7 408 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 LINC00299Q6ZSB3 139 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 GABPB2Q8TAK5 448 aaPredicted RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 NOL6Q9H6R4 1146 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 NEK6Q9HC98 313 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 KMT5AQ9NQR1 393 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 AGPAT4Q9NRZ5 378 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 NYAP2Q9P242 653 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 VTI1BQ9UEU0 232 aa13.06□□□□□ -0.32
PRPF4-201ENST00000374198 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
PRPF4-201ENST00000374198 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SYNCRIPO60506 623 aaKnown RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 METTL18O95568 372 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 JUNP05412 331 aaKnown RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 GARTP22102 1010 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 LIG4P49917 911 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 PLA2G16P53816 162 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CLCQ05315 142 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CDC20Q12834 499 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 STX5Q13190 355 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TBCELQ5QJ74 424 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 BROXQ5VW32 411 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TRMT1LQ7Z2T5 733 aaKnown RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TFAP2DQ7Z6R9 452 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ARMC8Q8IUR7 673 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SFRP1Q8N474 314 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 EMC1Q8N766 993 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CLSTN3Q9BQT9 956 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CPNE5Q9HCH3 593 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ACSS2Q9NR19 701 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CACNA2D2Q9NY47 1150 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 HACD3Q9P035 362 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 PKD2L1Q9P0L9 805 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF229Q9UJW7 825 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 FAM172BPA6NC97 362 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ASNA1O43681 348 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SCO2O43819 266 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 DEAF1O75398 565 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ENDOD1O94919 500 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 PIGNO95427 931 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TPSB2P20231 275 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CCR10P46092 362 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CDH6P55285 790 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CHRNEQ04844 493 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 NAB1Q13506 487 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 PLCL1Q15111 1095 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TPSAB1Q15661 275 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CARTPTQ16568 116 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 FAAH2Q6GMR7 532 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 CASC4Q6P4E1 433 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms