RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TMEM86AQ8N2M4 240 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 TSNARE1Q96NA8 513 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 TBL1YQ9BQ87 522 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 FTHL17Q9BXU8 183 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 WDR41Q9HAD4 459 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CSNK1G1Q9HCP0 422 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 G3BP2Q9UN86 482 aaKnown RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 PTCH2Q9Y6C5 1203 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 PRSS51A0A1B0GVH4 220 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 BTBD19C9JJ37 291 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 NPHS1O60500 1241 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 BCAS2O75934 225 aaPredicted RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 CCNCP24863 283 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 CTBP1Q13363 440 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 AP1ARQ63HQ0 302 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 FCRL5Q96RD9 977 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 RAB26Q9ULW5 256 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 RTN3O95197 1032 aaPredicted RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 ADRA1AP35348 466 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 MSX2P35548 267 aaPredicted RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 PKNOX1P55347 436 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 ESRP1Q6NXG1 681 aaKnown RBP12.91□□□□□ -0.34
CTPS1-202ENST00000372621 TAC4Q86UU9 113 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 ARHGAP12Q8IWW6 846 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 NAT14Q8WUY8 206 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 OSBPL2Q9H1P3 480 aa12.91□□□□□ -0.34
CTPS1-202ENST00000372621 SMIM31A0A1B0GVY4 71 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 FAM95CA0A1B0GW59 222 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 VAPBO95292 243 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 STMN1P16949 149 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 COG7P83436 770 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 RARS2Q5T160 578 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SATL1Q86VE3 508 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 DLG3Q92796 817 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 MARK4Q96L34 752 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 EFCAB1Q9HAE3 211 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 MRM3Q9HC36 420 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TREX1Q9NSU2 369 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PCDHGB4Q9UN71 923 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PCDHGB5Q9Y5G0 923 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TIMM13Q9Y5L4 95 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 STX16-NPEPL1H3BU86 382 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SDHDO14521 159 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TXNDC9O14530 226 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 CRTAMO95727 393 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 ME2P23368 584 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SLC1A2P43004 574 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 DNAJB13P59910 316 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 LSAMPQ13449 338 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 POU6F1Q14863 301 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SPATA6LQ8N4H0 392 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TXNDC5Q8NBS9 432 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 IRGQQ8WZA9 623 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 LRGUKQ96M69 825 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 MRPL46Q9H2W6 279 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 CDH9Q9ULB4 789 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 MAFKO60675 156 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 ENO3P13929 434 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PSMD8P48556 350 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 CLCN2P51788 898 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 DYNC1I2Q13409 638 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 CHSY3Q70JA7 882 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 C2CD4AQ8NCU7 369 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SMARCD1Q96GM5 515 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 OMDQ99983 421 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 MRPL57Q9BQC6 102 aaKnown RBP12.9□□□□□ -0.34
CTPS1-202ENST00000372621 GLOD4Q9HC38 313 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 SLC2A6Q9UGQ3 507 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 TCAF1Q9Y4C2 921 aa12.9□□□□□ -0.34
CTPS1-202ENST00000372621 PTPRDP23468 1912 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms