RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PRPSAP1Q14558 356 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 MS4A13Q5J8X5 152 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 IZUMO2Q6UXV1 221 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 NPAS4Q8IUM7 802 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 RFWD2Q8NHY2 731 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 ACMSDQ8TDX5 336 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 FCRL5Q96RD9 977 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 PRDM5Q9NQX1 630 aaPredicted RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 SIRPGQ9P1W8 387 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 GSRP00390 522 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 F7P08709 466 aaPredicted RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 SLC2A3P11169 496 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 GP5P40197 560 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 GRIA2P42262 883 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 HPCAP84074 193 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 CDH17Q12864 832 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 PSMD5Q16401 504 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 FYB2Q5VWT5 728 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 NAPEPLDQ6IQ20 393 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 ST13P4Q8IZP2 240 aaPredicted RBP12.99□□□□□ -0.33
GPC3-201ENST00000370818 ZNF778Q96MU6 729 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 CPNE1Q99829 537 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 ECSITQ9BQ95 431 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 TAS2R1Q9NYW7 299 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
GPC3-201ENST00000370818 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 IL1BP01584 269 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 HLA-DQB2P05538 268 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 DSG1Q02413 1049 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 PLOD1Q02809 727 aaPredicted RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 DUSP4Q13115 394 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 ALFQ53S48 1182 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 DUS1LQ6P1R4 473 aaKnown RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 NMD3Q96D46 503 aaKnown RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 NSL1Q96IY1 281 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 PAK6Q9NQU5 681 aaPredicted RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 DCTN4Q9UJW0 460 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 EMCNQ9ULC0 261 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 SOX13Q9UN79 622 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 AAR2Q9Y312 384 aaKnown RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 MAGEB16A2A368 324 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 CNTN5O94779 1100 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 PEX11BO96011 259 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 HAPLN1P10915 354 aaPredicted RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 NMBRP28336 390 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 CRABP2P29373 138 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 SULT2A1Q06520 285 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 CBX3Q13185 183 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 ARHGEF6Q15052 776 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 HSP90AA5PQ58FG0 334 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 TEDDM1Q5T9Z0 273 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 DENND5AQ6IQ26 1287 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 TFAP2DQ7Z6R9 452 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 UMODL1-AS1Q8N2C9 162 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 ZBTB8BQ8NAP8 495 aaPredicted RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 MCUR1Q96AQ8 359 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 SPATA17Q96L03 361 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 TUBB6Q9BUF5 446 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 RBM22Q9NW64 420 aaKnown RBP eCLIP12.98□□□□□ -0.334e-11■□□□□ 11.3
GPC3-201ENST00000370818 MARCH2Q9P0N8 246 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
GPC3-201ENST00000370818 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
GPC3-201ENST00000370818 IGLV3-10A0A075B6K4 115 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ADAM12O43184 909 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TGDSO95455 350 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 DLDP09622 509 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
GPC3-201ENST00000370818 SERPINB3P29508 390 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 CCL23P55773 120 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 HTRA3P83110 453 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 BST1Q10588 318 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TRIP4Q15650 581 aaPredicted RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.97□□□□□ -0.339e-7■■■□□ 16.8
GPC3-201ENST00000370818 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 GRTP1Q5TC63 336 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 LINC00523Q86TU6 105 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 IPMKQ8NFU5 416 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 SLC35B4Q969S0 331 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 PPP1R14BQ96C90 147 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 RBBP8Q99708 897 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TBL1YQ9BQ87 522 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 MCMBPQ9BTE3 642 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms