RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PRMT9Q6P2P2 845 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 FAM220AQ7Z4H9 259 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 KCTD4Q8WVF5 259 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 ZNF354BQ96LW1 612 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 VPS35Q96QK1 796 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 TMEM138Q9NPI0 162 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 SCN2BO60939 215 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 IL12RB1P42701 662 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 NRG1Q02297 640 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 TERB1Q8NA31 727 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 SMYD1Q8NB12 490 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 MLPHQ9BV36 600 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 DNMT3LQ9UJW3 386 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 CCL16O15467 120 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 KDELR1P24390 212 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 NR2C2P49116 596 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 MCL1Q07820 350 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 GET4Q7L5D6 327 aaPredicted RBP18.34■□□□□ 0.53
SNX27-202ENST00000368841 MAB21L3Q8N8X9 362 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 FRMD6Q96NE9 622 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 ZNF304Q9HCX3 659 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 KCNK18Q7Z418 384 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 ZDHHC13Q8IUH4 622 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 TNS4Q8IZW8 715 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 OR52K2Q8NGK3 314 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 TEKT5Q96M29 485 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 TBCBQ99426 244 aa18.34■□□□□ 0.53
SNX27-202ENST00000368841 PSIP1O75475 530 aaKnown RBP18.33■□□□□ 0.53
SNX27-202ENST00000368841 ZNF268Q14587 947 aaPredicted RBP18.33■□□□□ 0.53
SNX27-202ENST00000368841 WDR59Q6PJI9 974 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 PPP1R16AQ96I34 528 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 EPB41L4BQ9H329 900 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 CAMSAP1Q5T5Y3 1602 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 PAPSS1O43252 624 aaPredicted RBP18.33■□□□□ 0.53
SNX27-202ENST00000368841 PTPN5P54829 565 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 CAB39LQ9H9S4 337 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 KPNA6O60684 536 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 HDCP19113 662 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 KRR1Q13601 381 aaKnown RBP18.33■□□□□ 0.53
SNX27-202ENST00000368841 MCUBQ9NWR8 336 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.33■□□□□ 0.53
SNX27-202ENST00000368841 CD84Q9UIB8 345 aa18.33■□□□□ 0.53
SNX27-202ENST00000368841 RBM7Q9Y580 266 aaKnown RBP18.33■□□□□ 0.53
SNX27-202ENST00000368841 SALL1Q9NSC2 1324 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 GOT1P17174 413 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 IRF8Q02556 426 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 SLC34A1Q06495 639 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 FAM129CQ86XR2 697 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 VANGL1Q8TAA9 524 aaPredicted RBP18.33■□□□□ 0.52
SNX27-202ENST00000368841 MECRQ9BV79 373 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 BRD9Q9H8M2 597 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 FANCEQ9HB96 536 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 CDH9Q9ULB4 789 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 SNX6Q9UNH7 406 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 MYRFQ9Y2G1 1151 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 ARIH1Q9Y4X5 557 aaPredicted RBP18.33■□□□□ 0.52
SNX27-202ENST00000368841 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 TNFRSF21O75509 655 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 C21orf59P57076 290 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 SEC23AQ15436 765 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 TCEAL5Q5H9L2 206 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.33■□□□□ 0.52
SNX27-202ENST00000368841 MBOAT7Q96N66 472 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 PLK2Q9NYY3 685 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 AKAP7Q9P0M2 348 aaPredicted RBP18.33■□□□□ 0.52
SNX27-202ENST00000368841 NR2F1P10589 423 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 JAK1P23458 1154 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 CTBP1Q13363 440 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 ZNHIT3Q15649 155 aaPredicted RBP18.33■□□□□ 0.52
SNX27-202ENST00000368841 OFCC1Q8IZS5 231 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 NAT9Q9BTE0 207 aa18.33■□□□□ 0.52
SNX27-202ENST00000368841 GRIA4P48058 902 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 SLC26A2P50443 739 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 CDYL2Q8N8U2 506 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 FKBP6O75344 327 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 PCCBP05166 539 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 IFNGR2P38484 337 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 MYBPC2Q14324 1141 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 UNC5AQ6ZN44 842 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 APTXQ7Z2E3 356 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 OR52L1Q8NGH7 329 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 C1QTNF7Q9BXJ2 289 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 CRISPLD1Q9H336 500 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 ALKBH4Q9NXW9 302 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 MRPS23Q9Y3D9 190 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 HNRNPLP14866 589 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX27-202ENST00000368841 CD52P31358 61 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 MSX2P35548 267 aaPredicted RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 PIK3CGP48736 1102 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 CDK16Q00536 496 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 TRHDEQ9UKU6 1024 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 CEP170BQ9Y4F5 1589 aaPredicted RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 NPEPPSL1A6NEC2 478 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 POLR2LP62875 67 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 ELAVL2Q12926 359 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms