RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TGFB1I1O43294 461 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CYP3A5P20815 502 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 PEX2P28328 305 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ADSSP30520 456 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 LIG4P49917 911 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CLCNKBP51801 687 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CLRN1P58418 232 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 SEMA5AQ13591 1074 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ALCAMQ13740 583 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 MORC3Q14149 939 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 KLHL40Q2TBA0 621 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 PABPC1LQ4VXU2 614 aaKnown RBP8.29□□□□□ -1.08
YBX3-204ENST00000366290 GLRA4Q5JXX5 417 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ZFYVE27Q5T4F4 411 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 IL31Q6EBC2 164 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ZNF529Q6P280 563 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 PDXDC1Q6P996 788 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CYP26C1Q6V0L0 522 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 C15orf39Q6ZRI6 1047 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 LNX1Q8TBB1 728 aaPredicted RBP8.29□□□□□ -1.08
YBX3-204ENST00000366290 LRTOMTQ8WZ04 291 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CCDC34Q96HJ3 373 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 TTPALQ9BTX7 342 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 LSM14BQ9BX40 385 aaKnown RBP8.29□□□□□ -1.08
YBX3-204ENST00000366290 PLEKHA4Q9H4M7 779 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 SFXN1Q9H9B4 322 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CACNG4Q9UBN1 327 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CPSF3Q9UKF6 684 aaKnown RBP8.29□□□□□ -1.08
YBX3-204ENST00000366290 SLC30A1Q9Y6M5 507 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CFAP54Q96N23 3096 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 UBE4BO95155 1302 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 SYN3O14994 580 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 KIAA0391O15091 583 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 TRAPPC3O43617 180 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 B3GAT3O94766 335 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 SMC2O95347 1197 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 GLUD1P00367 558 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 SBK3P0C264 359 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 MTHFD1P11586 935 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 KLRC2P26717 231 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 LRPAP1P30533 357 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 MSX2P35548 267 aaPredicted RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 MTHFRP42898 656 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 AARSP49588 968 aaKnown RBP eCLIP8.28□□□□□ -1.08
YBX3-204ENST00000366290 RAP2BP61225 183 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 OSTNP61366 133 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 ZCWPW2Q504Y3 356 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 CCDC183Q5T5S1 534 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 ZNF658Q5TYW1 1059 aaPredicted RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 FAM171A1Q5VUB5 890 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 CES5AQ6NT32 575 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 RTL10Q7L3V2 364 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 GPR149Q86SP6 731 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 PPP1R3BQ86XI6 285 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 CD302Q8IX05 232 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 FUKQ8N0W3 1084 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 BRIX1Q8TDN6 353 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 EDAQ92838 391 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 BICD1Q96G01 975 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 B3GALT6Q96L58 329 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 RIPOR3Q96MK2 946 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 CLSTN3Q9BQT9 956 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 CPPED1Q9BRF8 314 aaPredicted RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 NDC1Q9BTX1 674 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 C1orf43Q9BWL3 253 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 ZNF700Q9H0M5 742 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 MRPL46Q9H2W6 279 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 SIDT1Q9NXL6 827 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 MTRRQ9UBK8 725 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 HOOK1Q9UJC3 728 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 ZFR2Q9UPR6 939 aaKnown RBP8.28□□□□□ -1.08
YBX3-204ENST00000366290 DERAQ9Y315 318 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 SCN1AP35498 2009 aa8.28□□□□□ -1.08
YBX3-204ENST00000366290 TCRBV7S2A1N4TA0A589 114 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 M0QZQ0 153 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 PODXLO00592 558 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 GPR42O15529 346 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 PRICKLE3O43900 615 aaPredicted RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 TBC1D4O60343 1298 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 PEX14O75381 377 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 CXCL8P10145 99 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 PAX3P23760 479 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 TNFSF9P41273 254 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 PRCPP42785 496 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 NEK3P51956 506 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 FOXL1Q12952 345 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 ELAVL1Q15717 326 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 SLC8B1Q6J4K2 584 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 CAVIN1Q6NZI2 390 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 GPRIN1Q7Z2K8 1008 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 CIR1Q86X95 450 aaPredicted RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 NELFCDQ8IXH7 590 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 GUF1Q8N442 669 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 D2HGDHQ8N465 521 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms