RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 INAVAQ3KP66 663 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 INO80DQ53TQ3 878 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SEL1L3Q68CR1 1132 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 SCYL2Q6P3W7 929 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 GCNT7Q6ZNI0 430 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 PARS2Q7L3T8 475 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 ABI3BPQ7Z7G0 1075 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KLK6Q92876 244 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 KLHDC7BQ96G42 594 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 EDEM3Q9BZQ6 932 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 HAUS4Q9H6D7 363 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 DYRK4Q9NR20 520 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 FTSJ1Q9UET6 329 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
TNFRSF1A-202ENST00000366159 TMEM191CA6NGB0 347 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZSCAN5CA6NGD5 496 aaPredicted RBP13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.194e-9■■□□□ 13.4
TNFRSF1A-202ENST00000366159 HNRNPA2B1P22626 353 aaKnown RBP13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PBX1P40424 430 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SERINC3Q13530 473 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MYLK3Q32MK0 819 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZNF805Q5CZA5 627 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FIGNQ5HY92 759 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KIAA1161Q6NSJ0 714 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LEKR1Q6ZMV7 388 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TMC6Q7Z403 805 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DNAAF5Q86Y56 855 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SLC25A45Q8N413 288 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 BMFQ96LC9 184 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 C1QTNF2Q9BXJ5 285 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ZDHHC6Q9H6R6 413 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LRRC19Q9H756 370 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FZD3Q9NPG1 666 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PARVAQ9NVD7 372 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MFHAS1Q9Y4C4 1052 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PCDHGA1Q9Y5H4 931 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HS3ST3A1Q9Y663 406 aa13.9□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ANKRD62A6NC57 917 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RASA4BC9J798 803 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ENC1O14682 589 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RASA4O43374 803 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PCDH8O95206 1070 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 POP4O95707 220 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LDOC1O95751 146 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 THEGLP0DJG4 465 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GIMD1P0DJR0 217 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HTR7P34969 479 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ABL2P42684 1182 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DNA2P51530 1060 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SNRPD1P62314 119 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RPS21P63220 83 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PARP15Q460N3 678 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FILIP1LQ4L180 1135 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PROSER1Q86XN7 944 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 SLC22A18ASQ8N1D0 253 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GALNT15Q8N3T1 639 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 OR13H1Q8NG92 308 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 OR6K2Q8NGY2 324 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FAM174AQ8TBP5 190 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FNIP1Q8TF40 1166 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CASKIN2Q8WXE0 1202 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ASB12Q8WXK4 309 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RAB7BQ96AH8 199 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 HMCESQ96FZ2 354 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FEM1CQ96JP0 617 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CNDP2Q96KP4 475 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LENG8Q96PV6 779 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLF6Q99612 283 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 EPAS1Q99814 870 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TRPM6Q9BX84 2022 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 AREL1O15033 823 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RAD51BO15315 384 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FGF10O15520 208 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ATMINO43313 823 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TSPAN6O43657 245 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 BUB1O43683 1085 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CREB3O43889 395 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TMCC1O94876 653 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PAK4O96013 591 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 C1SP09871 688 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 AKT2P31751 481 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ACADVLP49748 655 aa13.88□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CLDN2P57739 230 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms