RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HS6ST1O60243 411 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 KRT8P05787 483 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 CCR10P46092 362 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 SEMA5AQ13591 1074 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 KCNJ11Q14654 390 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 PEBP4Q96S96 227 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 TMPRSS4Q9NRS4 437 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 TMCO1Q9UM00 188 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 NRP2O60462 931 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 DNAJA2O60884 412 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 SORBS2O94875 1100 aaKnown RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 MT-CYBP00156 380 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 HOXC6P09630 235 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 PCID2Q5JVF3 399 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 CELF3Q5SZQ8 465 aaKnown RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 SLC9A4Q6AI14 798 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 MILR1Q7Z6M3 343 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 RELL1Q8IUW5 271 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 CCDC103Q8IW40 242 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 FSTL5Q8N475 847 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 CBR4Q8N4T8 237 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 SLC39A3Q9BRY0 314 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 ARMC7Q9H6L4 198 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 PNMA8BQ9ULN7 279 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 ANKRD6Q9Y2G4 727 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 MYO5AQ9Y4I1 1855 aaKnown RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 TMEM114B3SHH9 223 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 ZSCAN9O15535 394 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 PTPN1P18031 435 aaKnown RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 S100A5P33763 92 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 RAD51Q06609 339 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 LRRC8DQ7L1W4 858 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 TAS1R3Q7RTX0 852 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 NRG4Q8WWG1 115 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 PTCD3Q96EY7 689 aaKnown RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 ADAM28Q9UKQ2 775 aa14.05□□□□□ -0.16
COL6A1-201ENST00000361866 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-201ENST00000361866 CCDC154A6NI56 674 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 RGS5O15539 181 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 RFPL1O75677 317 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TOMM70O94826 608 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 LINC00032P0C843 101 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NPR3P17342 541 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 LIMK2P53671 638 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 LRRC74AQ0VAA2 488 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TCEAL1Q15170 157 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ANKS6Q68DC2 871 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TRIM74Q86UV6 250 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TRIM73Q86UV7 250 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 GPRC5AQ8NFJ5 357 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 HSFY1Q96LI6 401 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 BTBD9Q96Q07 612 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 RBBP8Q99708 897 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NXF3Q9H4D5 531 aaKnown RBP14.04□□□□□ -0.16
COL6A1-201ENST00000361866 RHOJQ9H4E5 214 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 HPS4Q9NQG7 708 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 DNAJC28Q9NX36 388 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 MFHAS1Q9Y4C4 1052 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 SYNDIG1LA6NDD5 238 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 A6NHS1 94 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 MSCO60682 206 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NMBRP28336 390 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NDUFV1P49821 464 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 PGAM4Q8N0Y7 254 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 METTL6Q8TCB7 284 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 GPR63Q9BZJ6 419 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-201ENST00000361866 KANSL1LA0AUZ9 987 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 LTA4HP09960 611 aaKnown RBP14.04□□□□□ -0.16
COL6A1-201ENST00000361866 PRKAA2P54646 552 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 CUZD1Q86UP6 607 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ZDHHC13Q8IUH4 622 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 BPIFB6Q8NFQ5 453 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 GAD1Q99259 594 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ZMYM5Q9UJ78 669 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ANAPC2Q9UJX6 822 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NUP188Q5SRE5 1749 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 CFAP99D6REC4 459 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 HSMCR30P0CW71 290 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 SLC2A4P14672 509 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NR1D2Q14995 579 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 INSCQ1MX18 579 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 VPS26BQ4G0F5 336 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 METTL21CQ5VZV1 264 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 HORMAD1Q86X24 394 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 NIPA2Q8N8Q9 360 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 ACTRT2Q8TDY3 377 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 TCF12Q99081 682 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 PLGRKTQ9HBL7 147 aa14.04□□□□□ -0.16
COL6A1-201ENST00000361866 SLC38A7Q9NVC3 462 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms