RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TUBB3Q13509 450 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 GDF6Q6KF10 455 aaPredicted RBP16.41■□□□□ 0.22
IFT140-201ENST00000361339 AGMOQ6ZNB7 445 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 ADGRG6Q86SQ4 1221 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 C1orf21Q9H246 121 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 INIPQ9NRY2 104 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 CIDEBQ9UHD4 219 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
IFT140-201ENST00000361339 TSC2P49815 1807 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 ZCWPW2A0A1B0GU75 182 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 ARL5CA6NH57 179 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 CDH2P19022 906 aaPredicted RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 IDH3AP50213 366 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 SERPINB9P50453 376 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MAPK10P53779 464 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 FLOT2Q14254 428 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 TAC4Q86UU9 113 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 SPATA6LQ8N4H0 392 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MARK4Q96L34 752 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 COLEC11Q9BWP8 271 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MRPS26Q9BYN8 205 aaKnown RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 RBM38Q9H0Z9 239 aaKnown RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 NDFIP2Q9NV92 336 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MKS1Q9NXB0 559 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 OR12D3Q9UGF7 316 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 FBXW11Q9UKB1 542 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MSI1O43347 362 aaKnown RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 MGEA5O60502 916 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MT-CYBP00156 380 aaPredicted RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 CHRNA1P02708 482 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 LTFP02788 710 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 NMBRP28336 390 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 PRAMEP78395 509 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 RARS2Q5T160 578 aaKnown RBP16.4■□□□□ 0.22
IFT140-201ENST00000361339 GRAMD4Q6IC98 578 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 KBTBD6Q86V97 674 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 LRRTM3Q86VH5 581 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 MYLPFQ96A32 169 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 RRN3Q9NYV6 651 aa16.4■□□□□ 0.22
IFT140-201ENST00000361339 KLHL2O95198 593 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 XRCC1P18887 633 aaPredicted RBP16.39■□□□□ 0.21
IFT140-201ENST00000361339 AVPR1AP37288 418 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 ZNF460Q14592 562 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 FAM91A1Q658Y4 838 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 RWDD4Q6NW29 188 aaKnown RBP16.39■□□□□ 0.21
IFT140-201ENST00000361339 TIFABQ6ZNK6 161 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 MARVELD2Q8N4S9 558 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 CNTD1Q8N815 330 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 ACTRT2Q8TDY3 377 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 LENG8Q96PV6 779 aaPredicted RBP16.39■□□□□ 0.21
IFT140-201ENST00000361339 PKP2Q99959 881 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 AP5M1Q9H0R1 490 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 CEPT1Q9Y6K0 416 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 ZBTB14O43829 449 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 POLBP06746 335 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 MLNP12872 115 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 OGFRL1Q5TC84 451 aaPredicted RBP16.39■□□□□ 0.21
IFT140-201ENST00000361339 CST9Q5W186 159 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 PGM2L1Q6PCE3 622 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 C4orf22Q6V702 233 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 LILRA2Q8N149 483 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 FNDC8Q8TC99 324 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 CDKL2Q92772 493 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 ATXN3LQ9H3M9 355 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 IARS2Q9NSE4 1012 aaKnown RBP16.39■□□□□ 0.21
IFT140-201ENST00000361339 IGSF9Q9P2J2 1179 aa16.39■□□□□ 0.21
IFT140-201ENST00000361339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 IL1BP01584 269 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 OR4Q2P0C623 313 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 THRAP10827 490 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 COL6A2P12110 1019 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 COX4I1P13073 169 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 PSTKQ8IV42 348 aaKnown RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 BHLHE22Q8NFJ8 381 aaPredicted RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 JADE3Q92613 823 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 BTBD9Q96Q07 612 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 TXNDC16Q9P2K2 825 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 RCOR3Q9P2K3 495 aaPredicted RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 RSL24D1Q9UHA3 163 aaKnown RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 SFMBT1Q9UHJ3 866 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 PSMD13Q9UNM6 376 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 PHGDHO43175 533 aaKnown RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 SEC24DO94855 1032 aaPredicted RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 THP07101 528 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 GLRBP48167 497 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 THOP1P52888 689 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 TRIM32Q13049 653 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 NOMO2Q5JPE7 1267 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 PATL1Q86TB9 770 aaKnown RBP16.38■□□□□ 0.21
IFT140-201ENST00000361339 TSPAN14Q8NG11 270 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 RNF34Q969K3 372 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 CMTM5Q96DZ9 223 aa16.38■□□□□ 0.21
IFT140-201ENST00000361339 PAIP1Q9H074 479 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms