RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PCDHA11Q9Y5I1 949 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 AP4B1Q9Y6B7 739 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 V9GYQ6 96 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 CITO14578 2027 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ERVK-10P10266 1014 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 CDK4P11802 303 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 GPD1P21695 349 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 LMO2P25791 158 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 SLC5A2P31639 672 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 NUDT2P50583 147 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 KPNA1P52294 538 aaPredicted RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 HPCAP84074 193 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 DUS1LQ6P1R4 473 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 AMIGO2Q86SJ2 522 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 SREK1Q8WXA9 508 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 TMEM176AQ96HP8 235 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ZNF512Q96ME7 567 aaPredicted RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 YME1L1Q96TA2 773 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 SH3GL1Q99961 368 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 SNRNP25Q9BV90 132 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 SMIM31A0A1B0GVY4 71 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 APOL1O14791 398 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ATP9BO43861 1147 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PENKP01210 267 aaPredicted RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 SERPINE1P05121 402 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 NCAM1P13591 858 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 GFAPP14136 432 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 RPL10P27635 214 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 RPL5P46777 297 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 CLCNKBP51801 687 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 IRF9Q00978 393 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 KLF10Q13118 480 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 RARS2Q5T160 578 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 TMEM198Q66K66 360 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 LAYNQ6UX15 382 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 NCCRP1Q6ZVX7 275 aaPredicted RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 THEM5Q8N1Q8 247 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ACVR1CQ8NER5 493 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 FLCNQ8NFG4 579 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 TMIGD2Q96BF3 282 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 RTP4Q96DX8 246 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PAWRQ96IZ0 340 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 SEMA6AQ9H2E6 1030 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 HIPK3Q9H422 1215 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 DPEP3Q9H4B8 488 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 CAB39LQ9H9S4 337 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PRDM16Q9HAZ2 1276 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ZC4H2Q9NQZ6 224 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 COPG2Q9UBF2 871 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 ARIH1Q9Y4X5 557 aaPredicted RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
TOP1-201ENST00000361337 BRCA2P51587 3418 aa9.23□□□□□ -0.93
TOP1-201ENST00000361337 A0A0J9YVX5 310 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TRIM64CA6NLI5 447 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 MAN1A2O60476 641 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 MFN2O95140 757 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CHRNGP07510 517 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 IRF1P10914 325 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 RALBP11234 206 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ARSAP15289 507 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 RPL17P18621 184 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 CASP2P42575 452 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ABCE1P61221 599 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 CDK18Q07002 472 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 STILQ15468 1287 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SPATA2LQ8IUW3 424 aaPredicted RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 PARP8Q8N3A8 854 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 MARVELD2Q8N4S9 558 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TRPV1Q8NER1 839 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 RIN3Q8TB24 985 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SLC7A14Q8TBB6 771 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 GFM2Q969S9 779 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 PKP2Q99959 881 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 PAAF1Q9BRP4 392 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TRIM39Q9HCM9 518 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TRPC7Q9HCX4 862 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 AURKCQ9UQB9 309 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 PDLIM1O00151 329 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 AP1G1O43747 822 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SOAT2O75908 522 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CD4P01730 458 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 LTFP02788 710 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 JUNP05412 331 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 PTPN1P18031 435 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 NR4A1P22736 598 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 MGAT1P26572 445 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TRPC1P48995 793 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TFDP2Q14188 446 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TARBP2Q15633 366 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 DCAF4L1Q3SXM0 396 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 KCNT2Q6UVM3 1135 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SNX32Q86XE0 403 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ZSCAN18Q8TBC5 510 aaPredicted RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 USP33Q8TEY7 942 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 JADE3Q92613 823 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms