RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 M0QYT0 321 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 AP3B1O00203 1094 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 MATN2O00339 956 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 SPTLC1O15269 473 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PABPC4LP0CB38 370 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 DNAJB1P25685 340 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 GATMP50440 423 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 MMEL1Q495T6 779 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 OGFRL1Q5TC84 451 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 TMEM126BQ8IUX1 230 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 COLGALT2Q8IYK4 626 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 CPSF7Q8N684 471 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 AGAP2Q99490 1192 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PAAF1Q9BRP4 392 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 SHCBP1LQ9BZQ2 653 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 TCF7L2Q9NQB0 619 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 NDUFA13Q9P0J0 144 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 BCAP29Q9UHQ4 241 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PSMD13Q9UNM6 376 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.58□□□□□ -0.4
UBA3-202ENST00000361055 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 SLCO1B7G3V0H7 640 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 HDAC3O15379 428 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 B3GAT3O94766 335 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 ERCC2P18074 760 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 CSRP3P50461 194 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 CLCN2P51788 898 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 PITX1P78337 314 aaPredicted RBP12.58□□□□□ -0.4
UBA3-202ENST00000361055 DEFB103AP81534 67 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 PPIDQ08752 370 aaKnown RBP12.58□□□□□ -0.4
UBA3-202ENST00000361055 ADIGQ0VDE8 80 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 MPP3Q13368 585 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 TRIP10Q15642 601 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 LRRC36Q1X8D7 754 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 DCLRE1AQ6PJP8 1040 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 C16orf89Q6UX73 402 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
UBA3-202ENST00000361055 LRRC43Q8N309 656 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 DNAAF3Q8N9W5 541 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 KYQ8NBH2 561 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 NETO2Q8NC67 525 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 ICA1LQ8NDH6 482 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 C3orf58Q8NDZ4 430 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 NTAN1Q96AB6 310 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 CCDC124Q96CT7 223 aaKnown RBP12.58□□□□□ -0.4
UBA3-202ENST00000361055 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 DRC3Q9H069 523 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 TMPRSS4Q9NRS4 437 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 NSMCE4AQ9NXX6 385 aa12.58□□□□□ -0.4
UBA3-202ENST00000361055 E9PBE3 544 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 KCNK1O00180 336 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 DENRO43583 198 aaKnown RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 KLHL41O60662 606 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 HUS1O60921 280 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 WARSP23381 471 aaKnown RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 DNAJB2P25686 324 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 PIK3R1P27986 724 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 PEX2P28328 305 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 GMPRP36959 345 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 AQP4P55087 323 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 SCAPQ12770 1279 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 PDK3Q15120 406 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZYG11AQ6WRX3 759 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TOP6BLQ8N6T0 577 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 OR52B2Q96RD2 323 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 VAT1Q99536 393 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 OXCT2Q9BYC2 517 aaPredicted RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 CPSF2Q9P2I0 782 aaKnown RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 VTI1BQ9UEU0 232 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 PSMD3O43242 534 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 B4GALT3O60512 393 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZMPSTE24O75844 475 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 TFEBP19484 476 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TKTP29401 623 aaKnown RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 OR1G1P47890 313 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ALDH1A3P47895 512 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 CHN2P52757 468 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 FOLH1Q04609 750 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 DLG1Q12959 904 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 SYPL2Q5VXT5 272 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ITPRIPL1Q6GPH6 555 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZFP1Q6P2D0 407 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 KCNMB4Q86W47 210 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms