RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 TRIM43BA6NCK2 446 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 QSOX1O00391 747 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 RAD51BO15315 384 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 MAD2L1Q13257 205 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 N4BP2L1Q5TBK1 243 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 TPGS2Q68CL5 300 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 APTXQ7Z2E3 356 aaKnown RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 GLT6D1Q7Z4J2 308 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 PTAR1Q7Z6K3 402 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 GJD3Q8N144 294 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 TRIM43Q96BQ3 446 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 ACSS3Q9H6R3 686 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 AGO3Q9H9G7 860 aaKnown RBP7.12□□□□□ -1.27
RAB5B-201ENST00000360299 DNAJC16Q9Y2G8 782 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 YIPF1Q9Y548 306 aa7.12□□□□□ -1.27
RAB5B-201ENST00000360299 PDZK1P1A8MUH7 402 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 C5orf58C9J3I9 102 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ADAMTS4O75173 837 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 KRT6AP02538 564 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 KRT6BP04259 564 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 GALTP07902 379 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 OR56A5P0C7T3 313 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 KRT6CP48668 564 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CLCN5P51795 746 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CSHL1Q14406 222 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ATP13A4Q4VNC1 1196 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ANKS6Q68DC2 871 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CDCA2Q69YH5 1023 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ZNF470Q6ECI4 717 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PKN3Q6P5Z2 889 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 USP45Q70EL2 814 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CXorf40AQ8TE69 158 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 SLC22A17Q8WUG5 538 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 LZICQ8WZA0 190 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ACDQ96AP0 544 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CDCA3Q99618 268 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 LMAN2LQ9H0V9 348 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 RNF39Q9H2S5 420 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 UBE2ZQ9H832 354 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 RMND5AQ9H871 391 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 SIX2Q9NPC8 291 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 GGT7Q9UJ14 662 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 GGA2Q9UJY4 613 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 FAM32AQ9Y421 112 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CPQQ9Y646 472 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CCDC88AQ3V6T2 1871 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 BCLAF3A2AJT9 711 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 RFPL2O75678 378 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ASGR2P07307 311 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 HLA-DPA1P20036 260 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 TPSB2P20231 275 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CST5P28325 142 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PSMD8P48556 350 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 UBE3AQ05086 875 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 EIF2B5Q13144 721 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 TPSAB1Q15661 275 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 FAM46CQ5VWP2 391 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 DAB2IPQ5VWQ8 1189 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 LYPLAL1Q5VWZ2 237 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 RAP1GAP2Q684P5 730 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 DNAJB7Q7Z6W7 309 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 NKAPQ8N5F7 415 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 LEMD2Q8NC56 503 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ZNF398Q8TD17 642 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 OLFM3Q96PB7 478 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CDX2Q99626 313 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PAK6Q9NQU5 681 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 POLG2Q9UHN1 485 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 TNPO3Q9Y5L0 923 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 STYXL1Q9Y6J8 313 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 KPNA5O15131 536 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CLDN11O75508 207 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CYP2A7P20853 494 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PSMB4P28070 264 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 MARCKSL1P49006 195 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CSTF1Q05048 431 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ZC3H3Q8IXZ2 948 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 OR14C36Q8NHC7 312 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 JOSD2Q8TAC2 188 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CERS2Q96G23 380 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 MYCBPQ99417 103 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 PBX4Q9BYU1 374 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CCDC134Q9H6E4 229 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 TAGLN3Q9UI15 199 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CDK5RAP2Q96SN8 1893 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 DDX60LQ5H9U9 1706 aaKnown RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 A0A1W2PQ67 120 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 A8MX80 341 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 LRCH4O75427 683 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 L1CAMP32004 1257 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 HK2P52789 917 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 AQP5P55064 265 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 GAD2Q05329 585 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 CAMK2GQ13555 558 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 GRM3Q14832 879 aa7.11□□□□□ -1.27
RAB5B-201ENST00000360299 ASTE1Q2TB18 679 aaPredicted RBP7.11□□□□□ -1.27
RAB5B-201ENST00000360299 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms