RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HNMTP50135 292 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 LSM3P62310 102 aaKnown RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SLC25A3Q00325 362 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 MYBPC1Q00872 1141 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ZNF549Q6P9A3 640 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 OR12D3Q9UGF7 316 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 LRCH1Q9Y2L9 728 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 A0A087WXM4 84 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 GPR1P46091 355 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 TUFMP49411 452 aaKnown RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 IRF8Q02556 426 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 TOP3AQ13472 1001 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 KATNAL2Q8IYT4 538 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 DNAJB14Q8TBM8 379 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 IPCEF1Q8WWN9 437 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ADAM2Q99965 735 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 C15orf38-AP3S2A0A0A6YYH1 394 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 HNF4AP41235 474 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ZC3H12AQ5D1E8 599 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ARPINQ7Z6K5 226 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 MRPS7Q9Y2R9 242 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 AP3D1O14617 1153 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 STX11O75558 287 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ARF5P84085 180 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 RAPSNQ13702 412 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ALKBH2Q6NS38 261 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 WDR59Q6PJI9 974 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SPATA6LQ8N4H0 392 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ETNPPLQ8TBG4 499 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 LENG9Q96B70 501 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 C1orf50Q9BV19 199 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 AKAP7Q9P0M2 348 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 PACSIN3Q9UKS6 424 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 CHADO15335 359 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SSNA1O43805 119 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 MGRN1O60291 552 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 UBAP2LQ14157 1087 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 MLPHQ9BV36 600 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 CMTM6Q9NX76 183 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 PTGFRNQ9P2B2 879 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ADM5C9JUS6 153 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 RECQL4O94761 1208 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SHBGP04278 402 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TGFB3P10600 412 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 WSCD1Q658N2 575 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SCIMPQ6UWF3 145 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 KBTBD2Q8IY47 623 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 STAG3L4Q8TBR4 150 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SENP8Q96LD8 212 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 IL22Q9GZX6 179 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 HMG20AQ9NP66 347 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 GMPPBQ9Y5P6 360 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TRAV19A0A0A6YYK7 116 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 AP5Z1O43299 807 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 PAX7P23759 505 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TSC22D1Q15714 1073 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 KIAA1324Q6UXG2 1013 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 POLNQ7Z5Q5 900 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 AENQ8WTP8 325 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 RACGAP1Q9H0H5 632 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TAS2R14Q9NYV8 317 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 VPS4AQ9UN37 437 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 C15orf41Q9Y2V0 281 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 RCVRNP35243 200 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TMEM138Q9NPI0 162 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SAR1AQ9NR31 198 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 ANGPT4Q9Y264 503 aa18.55■□□□□ 0.56
SHANK1-202ENST00000359082 TMA7Q9Y2S6 64 aaKnown RBP18.55■□□□□ 0.56
SHANK1-202ENST00000359082 SALL1Q9NSC2 1324 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 BIRC5O15392 142 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 FGF10O15520 208 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 ERCC2P18074 760 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 GRIA4P48058 902 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 CNTN2Q02246 1040 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 ABRQ12979 859 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 KLHL12Q53G59 568 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 PACS1Q6VY07 963 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 CAPSLQ8WWF8 208 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 FERD3LQ96RJ6 166 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 VAT1Q99536 393 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 SLC35C2Q9NQQ7 365 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 MTF2Q9Y483 593 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 SLC25A12O75746 678 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 ATP5C1P36542 298 aaKnown RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 SCNN1GP51170 649 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 RPL38P63173 70 aaKnown RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 SPIBQ01892 262 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 ZNF184Q99676 751 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 PIGUQ9H490 435 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 OR10H1Q9Y4A9 318 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 EIF4BP23588 611 aaKnown RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 CLK3P49761 638 aaKnown RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 TBX2Q13207 712 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-202ENST00000359082 GALNT3Q14435 633 aa18.54■□□□□ 0.56
SHANK1-202ENST00000359082 ALG11Q2TAA5 492 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms