RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 CSKP41240 450 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 MROH9Q5TGP6 573 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 MFN1Q8IWA4 741 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 CDKL2Q92772 493 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 CINPQ9BW66 212 aaPredicted RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 ACE2Q9BYF1 805 aaPredicted RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 VPS28Q9UK41 221 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 CLEC4EQ9ULY5 219 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 NOTCH4Q99466 2003 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 GFRA2O00451 464 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 PRAMEF12O95522 483 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 EPHA5P54756 1037 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ARF5P84085 180 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 MGAT5Q09328 741 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 HTR3DQ70Z44 454 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 C12orf76Q8N812 135 aaPredicted RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 ATP2A3Q93084 1043 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 AGAP2Q99490 1192 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 EPN3Q9H201 632 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 RETREG1Q9H6L5 497 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 TRANK1O15050 2925 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 KRT37O76014 449 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 PYGBP11216 843 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 GBP2P32456 591 aaPredicted RBP12.13□□□□□ -0.47
SYN3-202ENST00000358763 ABCG1P45844 678 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ERVK-21P61565 698 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 TNK2Q07912 1038 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 HSP90AA5PQ58FG0 334 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 FAM217AQ8IXS0 508 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 VPS45Q9NRW7 570 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 SLC2A6Q9UGQ3 507 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ZNF180Q9UJW8 692 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
SYN3-202ENST00000358763 HELZP42694 1942 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 CCDC195A0A1B0GUA6 201 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 HMX2A2RU54 273 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 AP3B1O00203 1094 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 TYROBPO43914 113 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 XYLBO75191 536 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 ARHGAP15Q53QZ3 475 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PCID2Q5JVF3 399 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 KCNMB4Q86W47 210 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 BBS5Q8N3I7 341 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PPHLN1Q8NEY8 458 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 FEM1AQ9BSK4 669 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 KIFC1Q9BW19 673 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 BPTFQ12830 3046 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PRRC2BQ5JSZ5 2229 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 PRKCGP05129 697 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 SCNN1BP51168 640 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 WDR4P57081 412 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 GALNT3Q14435 633 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 SLC1A5Q15758 541 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 ESRP1Q6NXG1 681 aaKnown RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 CYS1Q717R9 158 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
SYN3-202ENST00000358763 CENPTQ96BT3 561 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 NSMCE3Q96MG7 304 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 ZSWIM3Q96MP5 696 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 PBX4Q9BYU1 374 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 TCAF1Q9Y4C2 921 aa12.12□□□□□ -0.47
SYN3-202ENST00000358763 MYOFQ9NZM1 2061 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.473e-6■■■■□ 24
SYN3-202ENST00000358763 KRT38O76015 456 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 CEBPBP17676 345 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 HOXA9P31269 272 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 CYTH1Q15438 398 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 SIRPB2Q5JXA9 342 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 POTEHQ6S545 545 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
SYN3-202ENST00000358763 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
SYN3-202ENST00000358763 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 VPS51Q9UID3 782 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
SYN3-202ENST00000358763 C5orf42Q9H799 3197 aa12.11□□□□□ -0.47
SYN3-202ENST00000358763 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms