RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TFAP2DQ7Z6R9 452 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 FAM72BQ86X60 149 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CLEC4FQ8N1N0 589 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CBR4Q8N4T8 237 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 GRIN3AQ8TCU5 1115 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TRPM4Q8TD43 1214 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 GIPC3Q8TF64 312 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 SLC35F5Q8WV83 523 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 NUP205Q92621 2012 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CCDC28BQ9BUN5 200 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 DOCK5Q9H7D0 1870 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 POLR1BQ9H9Y6 1135 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 VTI1BQ9UEU0 232 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 UBQLN1Q9UMX0 589 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 C1orf232A0A0U1RR37 186 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 SLCO1B7G3V0H7 640 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 MATN2O00339 956 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 DLX3O60479 287 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 H2AFYO75367 372 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PFKMP08237 780 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CTSHP09668 335 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PIRTP0C851 137 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PSMA4P25789 261 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 NOS2P35228 1153 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CHRNA4P43681 627 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 HARS2P49590 506 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TAS2R39P59534 338 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 RAB10P61026 200 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 HPCAP84074 193 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 MYBPC1Q00872 1141 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 NIPAL4Q0D2K0 466 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TAZQ16635 292 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CYP51A1Q16850 503 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 SLC25A52Q3SY17 297 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 METTL21CQ5VZV1 264 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PARP8Q8N3A8 854 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CANT1Q8WVQ1 401 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 ARNTL2Q8WYA1 636 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 DLG3Q92796 817 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF512Q96ME7 567 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TSPYL2Q9H2G4 693 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PLAC1Q9HBJ0 212 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 FBRSL1Q9HCM7 1045 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PIGVQ9NUD9 493 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 OXSMQ9NWU1 459 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 SLX4Q8IY92 1834 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 C9IYK1 514 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SPTLC1O15269 473 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PARNO95453 639 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 AP2A1O95782 977 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 IL1BP01584 269 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SNRPB2P08579 225 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 PCNAP12004 261 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 YWHAQP27348 245 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ADRA1BP35368 520 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 INHBCP55103 352 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ARPP19P56211 112 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 GJA9P57773 515 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NAA20P61599 178 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NAB1Q13506 487 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TUBB3Q13509 450 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 GRIK4Q16099 956 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF484Q5JVG2 852 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 LDLRAP1Q5SW96 308 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 OGFRL1Q5TC84 451 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 AGAP9Q5VTM2 703 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NOTUMQ6P988 496 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZYG11AQ6WRX3 759 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 CYP4V2Q6ZWL3 525 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 UTS2BQ765I0 119 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ANKRD23Q86SG2 305 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ADGRG6Q86SQ4 1221 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM110Q86TL2 294 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZDHHC17Q8IUH5 632 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 DCBLD1Q8N8Z6 715 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 B3GALNT2Q8NCR0 500 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 OR6J1Q8NGC5 347 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SDCCAG3Q96C92 435 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 IFT43Q96FT9 208 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ZMAT2Q96NC0 199 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 KLHL32Q96NJ5 620 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 IL22Q9GZX6 179 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 MID1IP1Q9NPA3 183 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 NT5MQ9NPB1 228 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SPAG4Q9NPE6 437 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 UTP6Q9NYH9 597 aaKnown RBP6.64□□□□□ -1.35
CSDE1-203ENST00000358528 LMCD1Q9NZU5 365 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SLC2A6Q9UGQ3 507 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SUN2Q9UH99 717 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 ADAM28Q9UKQ2 775 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 CLEC11AQ9Y240 323 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 EVPLQ92817 2033 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 GOLGA8CPA6NN73 597 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 SUPT3HB4E1H0 165 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 TSPAN1O60635 241 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 AHSGP02765 367 aa6.64□□□□□ -1.35
CSDE1-203ENST00000358528 CES1P23141 567 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms