RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 NOTOA8MTQ0 251 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 KDM1AO60341 852 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 EDF1O60869 148 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 RBP3P10745 1247 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 ATF6P18850 670 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 CDKN2BP42772 138 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 ARPP19P56211 112 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 RPL10AP62906 217 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 DUSP4Q13115 394 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 C6orf52Q5T4I8 152 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 FYB2Q5VWT5 728 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 BSPRYQ5W0U4 402 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 DDHD1Q8NEL9 900 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 NEURL2Q9BR09 285 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 TTLL2Q9BWV7 592 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 MRPL17Q9NRX2 175 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 STAP1Q9ULZ2 295 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 SLC27A5Q9Y2P5 690 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 RWDD3Q9Y3V2 267 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 IRAK3Q9Y616 596 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 MYO16Q9Y6X6 1858 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 ZNF487B1APH4 448 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 E9PBE3 544 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 KDELR1P24390 212 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 ALDH18A1P54886 795 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 PITX1P78337 314 aaPredicted RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 CDO1Q16878 200 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 PDCD4Q53EL6 469 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 C6orf163Q5TEZ5 329 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 MFSD7Q6UXD7 560 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 SPOCD1Q6ZMY3 1216 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 MON1AQ86VX9 555 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 PSTKQ8IV42 348 aaKnown RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 PEX5LQ8IYB4 626 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 TRIML2Q8N7C3 387 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
SYNE1-203ENST00000354674 KLHL25Q9H0H3 589 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 PCDH12Q9NPG4 1184 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 ABCC13Q9NSE7 274 aa10.26□□□□□ -0.77
SYNE1-203ENST00000354674 C2CD2LO14523 706 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 PRPSAP2O60256 369 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 SEC24AO95486 1093 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 KRT1P04264 644 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ZDHHC11BP0C7U3 371 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 PHBP35232 272 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 PGFP49763 221 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 SULT1E1P49888 294 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 CDH15P55291 814 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 C9orf50Q5SZB4 431 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 SDHAF4Q5VUM1 108 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 EGFLAMQ63HQ2 1017 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 Q6ZNX1 250 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 DENND5BQ6ZUT9 1274 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 PDSS2Q86YH6 399 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ZNF75CPQ92670 426 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 TMEM120AQ9BXJ8 343 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 OSBPL8Q9BZF1 889 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 TRABDQ9H4I3 376 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 WDR6Q9NNW5 1121 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 NGRNQ9NPE2 291 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 KIAA1522Q9P206 1035 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 PCSK1NQ9UHG2 260 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 hCG_1818297A0A087WSY0 165 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 BHMG1C9JSJ3 638 aaPredicted RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ZMPSTE24O75844 475 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 SOAT2O75908 522 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 APOEP02649 317 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 RALAP11233 206 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ATXN1P54253 815 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 AIF1P55008 147 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 CSE1LP55060 971 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 NR1H3Q13133 447 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 OASLQ15646 514 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 INAQ16352 499 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 SMTNL2Q2TAL5 461 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ANO4Q32M45 955 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 MGAT5BQ3V5L5 792 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 TFDP3Q5H9I0 405 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 RALGPS1Q5JS13 557 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 KCNT1Q5JUK3 1230 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ANKMY2Q8IV38 441 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ULK2Q8IYT8 1036 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 EIF1ADQ8N9N8 165 aaKnown RBP10.25□□□□□ -0.77
SYNE1-203ENST00000354674 ICA1LQ8NDH6 482 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 CAPSLQ8WWF8 208 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 COX4I2Q96KJ9 171 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 NMUR1Q9HB89 426 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 IL1RAPL1Q9NZN1 696 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 FZD10Q9ULW2 581 aa10.25□□□□□ -0.77
SYNE1-203ENST00000354674 CCDC195A0A1B0GUA6 201 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 EXOC1LA0A1B0GW35 172 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 FCHO1O14526 889 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 TEX28O15482 410 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 BANF1O75531 89 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 MYL2P10916 166 aa10.24□□□□□ -0.77
SYNE1-203ENST00000354674 NCAM1P13591 858 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms