RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PAK4O96013 591 aaPredicted RBP16.15■□□□□ 0.18
PDGFA-201ENST00000354513 MT-CO3P00414 261 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 PTMSP20962 102 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 MMP8P22894 467 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 ADRA1BP35368 520 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 DAB2P98082 770 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
PDGFA-201ENST00000354513 CDO1Q16878 200 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 GPT2Q8TD30 523 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 RXFP2Q8WXD0 754 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 IFT43Q96FT9 208 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 PPP1R16AQ96I34 528 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 NOL6Q9H6R4 1146 aaKnown RBP16.15■□□□□ 0.18
PDGFA-201ENST00000354513 ZDHHC6Q9H6R6 413 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 TMEM248Q9NWD8 314 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 NLGN3Q9NZ94 848 aa16.15■□□□□ 0.18
PDGFA-201ENST00000354513 K7ESM1 405 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 OPA1O60313 960 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 MBD3O95983 291 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 NME1P15531 152 aaKnown RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 RECQLP46063 649 aaPredicted RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 HDAC4P56524 1084 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 RPS21P63220 83 aaKnown RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 CDR2Q01850 454 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 SLC20A2Q08357 652 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 TBC1D25Q3MII6 688 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 CDKAL1Q5VV42 579 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 LEKR1Q6ZMV7 388 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 PLPP6Q8IY26 295 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 FAM181AQ8N9Y4 354 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 ZNF548Q8NEK5 533 aaPredicted RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 SLC30A5Q8TAD4 765 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 CENPIQ92674 756 aaPredicted RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 ISG20Q96AZ6 181 aaKnown RBP16.14■□□□□ 0.17
PDGFA-201ENST00000354513 C11orf70Q9BRQ4 267 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 OSBPL2Q9H1P3 480 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 TMEM51Q9NW97 253 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 DNAJC28Q9NX36 388 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 OR12D3Q9UGF7 316 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
PDGFA-201ENST00000354513 SPTY2D1-AS1A0A0U1RR47 76 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 CXorf51AA0A1B0GTR3 108 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 A0A1W2PNU3 283 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 SCAMP1O15126 338 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 CASC3O15234 703 aaKnown RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 LZTS3O60299 673 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 LRIG2O94898 1065 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 CSF2P04141 144 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 PRB1P04280 392 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 UNGP13051 313 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 RHOQP17081 205 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 PTPN9P43378 593 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 DNA2P51530 1060 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 GSCP56915 257 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 PFN3P60673 137 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 E2F1Q01094 437 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 CCDC15Q0P6D6 951 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 EIF2B5Q13144 721 aaKnown RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 STRADAQ7RTN6 431 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 ZNF677Q86XU0 584 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 LENG8Q96PV6 779 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 UBL7Q96S82 380 aaPredicted RBP16.13■□□□□ 0.17
PDGFA-201ENST00000354513 KLC2Q9H0B6 622 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 NUP62CLQ9H1M0 184 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
PDGFA-201ENST00000354513 TCRBV5S1A1TA0A578 114 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 C16orf96A6NNT2 1141 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 PES1O00541 588 aaKnown RBP16.12■□□□□ 0.17
PDGFA-201ENST00000354513 AREL1O15033 823 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 GSRP00390 522 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 IGFALSP35858 605 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 MAPKAPK2P49137 400 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 POLR2FP61218 127 aaKnown RBP16.12■□□□□ 0.17
PDGFA-201ENST00000354513 KRT31Q15323 416 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 LRRC73Q5JTD7 316 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 ATXN7L2Q5T6C5 722 aaPredicted RBP16.12■□□□□ 0.17
PDGFA-201ENST00000354513 PCSK4Q6UW60 755 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 PARGQ86W56 976 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 DCP2Q8IU60 420 aaKnown RBP16.12■□□□□ 0.17
PDGFA-201ENST00000354513 NETO2Q8NC67 525 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 MSANTD4Q8NCY6 345 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 OR2AP1Q8NGE2 309 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 FAM174AQ8TBP5 190 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 BAP1Q92560 729 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 FGF11Q92914 225 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 VPS16Q9H269 839 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 TCEAL2Q9H3H9 227 aaPredicted RBP16.12■□□□□ 0.17
PDGFA-201ENST00000354513 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
PDGFA-201ENST00000354513 CFAP46Q8IYW2 2715 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 UGT2B4P06133 528 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 GP1BAP07359 652 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 ITIH2P19823 946 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 SDC4P31431 198 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 RFC1P35251 1148 aaPredicted RBP16.11■□□□□ 0.17
PDGFA-201ENST00000354513 SOX5P35711 763 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms