RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CMPK2Q5EBM0 449 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 MIS18BP1Q6P0N0 1132 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 THSD4Q6ZMP0 1018 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 SAMD14Q8IZD0 417 aaPredicted RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 PHTF2Q8N3S3 785 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 ERMNQ8TAM6 284 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 GIPC3Q8TF64 312 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 AMDHD1Q96NU7 426 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 HGH1Q9BTY7 390 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 NGRNQ9NPE2 291 aaKnown RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 ATP11BQ9Y2G3 1177 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 KIDINS220Q9ULH0 1771 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 XRN1Q8IZH2 1706 aaKnown RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 LOC100509620A0A075B734 347 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 A0A1B0GTW7 788 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 AQP7P3A6NL99 342 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 KDM4EB2RXH2 506 aaPredicted RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 PI4K2BG5E9Z4 385 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 OR52Z1P0C646 297 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 PET100P0DJ07 73 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 HNRNPLP14866 589 aaKnown RBP eCLIP6.06□□□□□ -1.44
RFC1-201ENST00000349703 PLTPP55058 493 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 GPLD1P80108 840 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 MZT1Q08AG7 82 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 NONOQ15233 471 aaKnown RBP eCLIP6.06□□□□□ -1.44
RFC1-201ENST00000349703 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 HMBOX1Q6NT76 420 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 CLEC4GQ6UXB4 293 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 C19orf35Q6ZS72 473 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 IQCKQ8N0W5 287 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 FAM181AQ8N9Y4 354 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 RNF169Q8NCN4 708 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 SPATA20Q8TB22 786 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.441e-14■■■■■ 56.1
RFC1-201ENST00000349703 ZNF398Q8TD17 642 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 ZNF483Q8TF39 744 aaPredicted RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 HDAC11Q96DB2 347 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 ELMO2Q96JJ3 720 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 DDOQ99489 341 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 PRMT1Q99873 361 aaKnown RBP6.06□□□□□ -1.44
RFC1-201ENST00000349703 MEAF6Q9HAF1 191 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 CCNB1IP1Q9NPC3 277 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 CNGB3Q9NQW8 809 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 FGFR1OP2Q9NVK5 253 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 TEKT2Q9UIF3 430 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 MAFFQ9ULX9 164 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 TRPV2Q9Y5S1 764 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 DUSP10Q9Y6W6 482 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 PRR36Q9H6K5 1346 aa6.06□□□□□ -1.44
RFC1-201ENST00000349703 TRIM49BA6NDI0 452 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 C5orf60A6NFR6 353 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 C9IYK1 514 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CBX4O00257 560 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ACKR2O00590 384 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GABRDO14764 452 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 USP2O75604 605 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 PRAMEF1O95521 474 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 IGKV5-2P06315 115 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 KRT7P08729 469 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PAEPP09466 180 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 RARGP13631 454 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NMT1P30419 496 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 WASP42768 502 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 LRRC32Q14392 662 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ZRANB3Q5FWF4 1079 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 WASHC2DQ5SRD0 308 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GRAMD4Q6IC98 578 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TBC1D10CQ8IV04 446 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MCOLN2Q8IZK6 566 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 LCORLQ8N3X6 602 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ATP6V0D2Q8N8Y2 350 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 CHST13Q8NET6 341 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 NANOS1Q8WY41 292 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 SDSLQ96GA7 329 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 DCAF5Q96JK2 942 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PITPNM3Q9BZ71 974 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 DCLK3Q9C098 648 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 EBF2Q9HAK2 575 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SMPD4Q9NXE4 827 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ARL15Q9NXU5 204 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PADI4Q9UM07 663 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 RPL26L1Q9UNX3 145 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 TBC1D30Q9Y2I9 924 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFC1-201ENST00000349703 SYNGAP1Q96PV0 1343 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PITPNM2Q9BZ72 1349 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 ALDOAP04075 364 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 PCCBP05166 539 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 BMP6P22004 513 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 HIBADHP31937 336 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 MAP2K3P46734 347 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 FKBP3Q00688 224 aaKnown RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 CAV1Q03135 178 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 MTM1Q13496 603 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 GSTA3Q16772 222 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 PLA1AQ53H76 456 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 DAB2IPQ5VWQ8 1189 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 SLC46A3Q7Z3Q1 461 aa6.05□□□□□ -1.44
RFC1-201ENST00000349703 TMEM102Q8N9M5 508 aaPredicted RBP6.05□□□□□ -1.44
RFC1-201ENST00000349703 ACTRT1Q8TDG2 376 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms